Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2178 CTGGTTCTCTCCCCTCAAGGGCTTGCTAACTATGACAAGCCCCCAGCAGATAAACCTCCTGTCCACAAGCCACCACCAGAGGAACCACCTGTCCACAAGCCACCACCAGAAAAACTACCTCTGCACAAGCCACCAGTAGAAAAACCACCAGTTTACAAGCCACCGGTTCACAAACCCCCTGTTGAGAAACCACCAGTGTACAAGAAGCCACCTGTGCATGAGTCTCAACATGAGAATCCTCCGAGGGGACCAGTTTTCAACCCACAGCCTCCAAAACCACCAGTTTATGGGCCACCAGTTAACAACCCACCATATGGGAAACCACCTTATCCGAACTTCCTAGTTCTGCTCTTTGCAGCTCTGGTTCTGTCCCCTCAAGGGCTTGCTAACTATGACAAGCCTCCTGTCTACAAGCCTCCCATTCAGAAGCCACCTGTGTACAAGCCCCCAGTAGAAAAGCCACCAGTTTACAAGCCCCCAGTAGAAAAACCACCAGTTTACAAGCCTCCAGTAGAGAAGCCACCAGTGTATAAGCCCCCAGTTCAGAAACCACCAGTATACAAGCCACCCTATGGAAAGCCACCAGTGCATGAGTCTCAATATGAGAAGGCCCCTCTTTATAAGTCACCACCAGTTTACAAGCCACCAGTTCACAAGCCACCAGTTGAGAAACCACCCGTTTACAAGCCACCTGTTCACAAGCCCCCAGTAGAAAAACCACCAGTTTACAAGCCACCAGTTCACAAGCCCCCAGTTGAGAAACCACCAGTGTACAAGCCACCATATGGGAAGCCACCAGTGCATGAGTCTCAATATGAGAAGCCCCCTGTTTATAAGTCACCACCAGTTTACAAGCCACCTGTTCACAAGCCTCCAGTAGAAAAACCACCAGTTTACAAGCCACCAGTTCACAAGCCCCCAGTAGAGAAACCACCAGTTTACAAGCCACCATACGGGAAGCCACCACACCCAAAGTACCCTCCAGGTTCTAACTGA 996 0.505 LVLSPQGLANYDKPPADKPPVHKPPPEEPPVHKPPPEKLPLHKPPVEKPPVYKPPVHKPPVEKPPVYKKPPVHESQHENPPRGPVFNPQPPKPPVYGPPVNNPPYGKPPYPNFLVLLFAALVLSPQGLANYDKPPVYKPPIQKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVQKPPVYKPPYGKPPVHESQYEKAPLYKSPPVYKPPVHKPPVEKPPVYKPPVHKPPVEKPPVYKPPVHKPPVEKPPVYKPPYGKPPVHESQYEKPPVYKSPPVYKPPVHKPPVEKPPVYKPPVHKPPVEKPPVYKPPYGKPPHPKYPPGSN* 332
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2178 331 Pfam Extensin-like protein repeat 54 63 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 311 318 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 29 38 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 40 48 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 291 300 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 215 224 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 230 239 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 134 143 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 301 310 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 174 183 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 281 290 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 144 153 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 154 163 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 296 303 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 235 244 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 245 254 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 93 100 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 255 262 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 49 58 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 286 295 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 164 173 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 240 247 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 220 229 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 59 68 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 210 219 IPR003883 GO:0005199
Pvu9g2178 331 Pfam Extensin-like protein repeat 184 191 IPR003883 GO:0005199
Pvu9g2178 331 MobiDBLite consensus disorder prediction 83 103 - -
Pvu9g2178 331 MobiDBLite consensus disorder prediction 166 331 - -
Pvu9g2178 331 PANTHER EARLY NODULIN-11 112 327 - -
Pvu9g2178 331 PANTHER EARLY NODULIN-11 1 110 - -
Pvu9g2178 331 MobiDBLite consensus disorder prediction 16 44 - -
Pvu9g2178 331 PANTHER - 1 110 - -
Pvu9g2178 331 PANTHER - 112 327 - -
Pvu9g2178 331 MobiDBLite consensus disorder prediction 137 152 - -
Pvu9g2178 331 PRINTS Proline rich extensin signature 13 29 - -
Pvu9g2178 331 PRINTS Proline rich extensin signature 32 49 - -
Pvu9g2178 331 PRINTS Proline rich extensin signature 50 75 - -
Pvu9g2178 331 PRINTS Proline rich extensin signature 84 96 - -
Pvu9g2178 331 MobiDBLite consensus disorder prediction 209 263 - -
Pvu9g2178 331 MobiDBLite consensus disorder prediction 129 152 - -
Pvu9g2178 331 MobiDBLite consensus disorder prediction 166 192 - -
Pvu9g2178 331 MobiDBLite consensus disorder prediction 45 61 - -
Pvu9g2178 331 MobiDBLite consensus disorder prediction 279 331 - -
Pvu9g2178 331 MobiDBLite consensus disorder prediction 1 103 - -
Pvu9g2178 331 MobiDBLite consensus disorder prediction 62 76 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2178 Pvu-Chr9 31274721 31281566 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2178 - K19922 pvu:PHAVU_009G211100g 56.9954