Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2177 ATGAAGAACATGGCTTCCTTAAGCTCCCTAGTTCTGCTTCTTGCAGCTCTGCTCCTGTCCCCTCAAGGGCTTGCTAACTATGACAAGCCCCCAGCAGATAAACCTCCTGTCCACAAGCCACCACCAGAGGAACCACCTGTCCACAAGCCACCACCAGAAAAACTACCTCTCCACAAGCCACCAGTAGAAAAACCACCAGTTTACAAGCCACCGGTTCACAAGCCCCCAGTTGAGAAACCACCAGTGTACAAGAAGCCACCTGTGCATGAGTCTCAACATGAGAATCCTCCGAGGGGACCAGTTTTCAACCCACAGCCTCCGAAACCACCAGTTTATGGGCCACCAGTTAACAACCCACCATATGGGAAACCACCTTATCCAAAGTATCCTCCCACTGATGACACCCGTTTCTGA 414 0.5145 MKNMASLSSLVLLLAALLLSPQGLANYDKPPADKPPVHKPPPEEPPVHKPPPEKLPLHKPPVEKPPVYKPPVHKPPVEKPPVYKKPPVHESQHENPPRGPVFNPQPPKPPVYGPPVNNPPYGKPPYPKYPPTDDTRF* 138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2177 137 MobiDBLite consensus disorder prediction 23 137 - -
Pvu9g2177 137 PANTHER - 4 130 - -
Pvu9g2177 137 PANTHER EARLY NODULIN-11 4 130 - -
Pvu9g2177 137 MobiDBLite consensus disorder prediction 32 60 - -
Pvu9g2177 137 MobiDBLite consensus disorder prediction 61 77 - -
Pvu9g2177 137 Pfam Extensin-like protein repeat 75 84 IPR003883 GO:0005199
Pvu9g2177 137 Pfam Extensin-like protein repeat 109 116 IPR003883 GO:0005199
Pvu9g2177 137 Pfam Extensin-like protein repeat 80 88 IPR003883 GO:0005199
Pvu9g2177 137 Pfam Extensin-like protein repeat 56 64 IPR003883 GO:0005199
Pvu9g2177 137 Pfam Extensin-like protein repeat 70 79 IPR003883 GO:0005199
Pvu9g2177 137 Pfam Extensin-like protein repeat 45 54 IPR003883 GO:0005199
Pvu9g2177 137 Pfam Extensin-like protein repeat 65 74 IPR003883 GO:0005199
Pvu9g2177 137 PRINTS Proline rich extensin signature 29 45 - -
Pvu9g2177 137 PRINTS Proline rich extensin signature 48 65 - -
Pvu9g2177 137 PRINTS Proline rich extensin signature 66 91 - -
Pvu9g2177 137 PRINTS Proline rich extensin signature 100 112 - -
Pvu9g2177 137 MobiDBLite consensus disorder prediction 78 92 - -
Pvu9g2177 137 MobiDBLite consensus disorder prediction 99 131 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2177 Pvu-Chr9 31269193 31269606 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2177 - K12032 pvu:PHAVU_009G211100g 83.5741