Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2176 ATGGCTTCCTTAAGCTTCCTAGTTCTGCTCTTTGCAGCTCTGGTTCTGTCCCCTCAAGGGCTTGCTAACTATGACAAGCCTCCTGTCTACAAGCCTCCCATTCAGAAGCCACCTGTGTACAAGCCCCCAGTAGAAAAGCCACCAGTTTACAAGCCCCCAGTAGAAAAACCACCAGTTTACAAGCCCCCAGTAGAAAAACCACCAGTGTATAAGCCCCCAGTTCAGAAACCACCAGTGTACAAGCCACCCTATGGGAAGCCACCAGTGCATGAGTCTCAATATGAGAAGGCCCCCCTTTATAAGTCACCACCACTTTACAAGCCACCAGTTCACAAGCCACCAGTTGAGAAACCACCCGTTTACAAGCCACCAGTTCACAAGCCACCGGTTGAGAAACCACCAGTGCACAAGCCACCGTATGGGAAGCCACCAGTGCAGGAGTCTCAATATGAGAAGCCCCCTGTTTATAAGTCACCACCAGTTTACAAGCCACCTGTTCACAAGCCTCCAGTAGAAAAACCACCAGTTTACAAACCCCCAGTTCACAAGCCCCCAGTAGAGAAACCACCAGTTTACAAGCCACCATACGGGAAGCCACCACACCCAAAGTACCCTCCAGGTTCTAACTGA 630 0.5063 MASLSFLVLLFAALVLSPQGLANYDKPPVYKPPIQKPPVYKPPVEKPPVYKPPVEKPPVYKPPVEKPPVYKPPVQKPPVYKPPYGKPPVHESQYEKAPLYKSPPLYKPPVHKPPVEKPPVYKPPVHKPPVEKPPVHKPPYGKPPVQESQYEKPPVYKSPPVYKPPVHKPPVEKPPVYKPPVHKPPVEKPPVYKPPYGKPPHPKYPPGSN* 210
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2176 209 MobiDBLite consensus disorder prediction 157 209 - -
Pvu9g2176 209 PANTHER EARLY NODULIN-11 1 205 - -
Pvu9g2176 209 Pfam Extensin-like protein repeat 118 125 IPR003883 GO:0005199
Pvu9g2176 209 Pfam Extensin-like protein repeat 159 168 IPR003883 GO:0005199
Pvu9g2176 209 Pfam Extensin-like protein repeat 77 84 IPR003883 GO:0005199
Pvu9g2176 209 Pfam Extensin-like protein repeat 174 183 IPR003883 GO:0005199
Pvu9g2176 209 Pfam Extensin-like protein repeat 47 56 IPR003883 GO:0005199
Pvu9g2176 209 Pfam Extensin-like protein repeat 108 117 IPR003883 GO:0005199
Pvu9g2176 209 Pfam Extensin-like protein repeat 67 76 IPR003883 GO:0005199
Pvu9g2176 209 Pfam Extensin-like protein repeat 123 132 IPR003883 GO:0005199
Pvu9g2176 209 Pfam Extensin-like protein repeat 113 122 IPR003883 GO:0005199
Pvu9g2176 209 Pfam Extensin-like protein repeat 164 173 IPR003883 GO:0005199
Pvu9g2176 209 Pfam Extensin-like protein repeat 169 178 IPR003883 GO:0005199
Pvu9g2176 209 Pfam Extensin-like protein repeat 57 66 IPR003883 GO:0005199
Pvu9g2176 209 Pfam Extensin-like protein repeat 179 188 IPR003883 GO:0005199
Pvu9g2176 209 Pfam Extensin-like protein repeat 37 46 IPR003883 GO:0005199
Pvu9g2176 209 Pfam Extensin-like protein repeat 133 140 IPR003883 GO:0005199
Pvu9g2176 209 Pfam Extensin-like protein repeat 103 112 IPR003883 GO:0005199
Pvu9g2176 209 Pfam Extensin-like protein repeat 27 36 IPR003883 GO:0005199
Pvu9g2176 209 Pfam Extensin-like protein repeat 189 196 IPR003883 GO:0005199
Pvu9g2176 209 PRINTS Adhesive plaque protein signature 21 42 IPR002964 GO:0005576
Pvu9g2176 209 PRINTS Adhesive plaque protein signature 60 77 IPR002964 GO:0005576
Pvu9g2176 209 PRINTS Adhesive plaque protein signature 107 126 IPR002964 GO:0005576
Pvu9g2176 209 MobiDBLite consensus disorder prediction 23 44 - -
Pvu9g2176 209 MobiDBLite consensus disorder prediction 59 85 - -
Pvu9g2176 209 MobiDBLite consensus disorder prediction 30 44 - -
Pvu9g2176 209 MobiDBLite consensus disorder prediction 102 141 - -
Pvu9g2176 209 PANTHER - 1 205 - -
Pvu9g2176 209 MobiDBLite consensus disorder prediction 59 209 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2176 Pvu-Chr9 31259365 31260282 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2176 - K06098 vra:106761481 55.8398