Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2170 ATGGAAGACGAAGGAAGCCATGTACGTGAAAGGTCATTAGCAGCACCTCTCATATTTTTGATTGTTGCTGCTTTTCAATTTGCATACTATTGCCTCGATCACGTTGCGAAGCAGAGTGGATCCGATAGAGAAAAAGAAGATCGGTTGCGTGCAGAAATAAAACAACTTTTGAAGGAGGCAAGTTCAATGTCGCAGCCATCAACATTTGCACGAGCAGCAAAACTCAAAAGGCTGGCAACTGCTAAGGAGAGGGAACTTTCAAAGTATCGACATTCAAGTCACAAAGATTATGCTGTATATTCAAAAGTGGTGCTCATATTTAAGTATTTAACATATGCAATGCTGCTTATGTGGTTTTGGCGTGTTCCTGTGGCTAGCGTACATCGGCAACTTGTGCAACCATTTGGGAGCTTGTTATCATGGAAGTCCGGAGGAGTTCAAAGTAACAGTGCCCCGATTGGGATAATATCTTGGTTAGTAATATGCGCAAGAGTTTGCAGATTTGTCCGTAGAGCTTATAGCAAATAA 528 0.4186 MEDEGSHVRERSLAAPLIFLIVAAFQFAYYCLDHVAKQSGSDREKEDRLRAEIKQLLKEASSMSQPSTFARAAKLKRLATAKERELSKYRHSSHKDYAVYSKVVLIFKYLTYAMLLMWFWRVPVASVHRQLVQPFGSLLSWKSGGVQSNSAPIGIISWLVICARVCRFVRRAYSK* 176
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2170 175 Pfam CHD5-like protein 26 162 IPR028945 GO:0071816
Pvu9g2170 175 PANTHER 30S/40S RIBOSOMAL PROTEIN S3 11 165 - -
Pvu9g2170 175 PANTHER BNAC07G33680D PROTEIN 11 165 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2170 Pvu-Chr9 31106073 31109228 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2170 K22384 - gmx:100790676 270.396