Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2147 ATGATCAACAGCCAAGATATATACAACACTCTTTCAGCTCTTGTGCCACTGTATGTGCCCATGATTCTGGCCTATGGCTCGGTCCGGTGGTGGAAGATCATCACGCCGGAACAGTGCACTGGCATAAACCGCTTCGTGGCATTTTTCTCAGCTCCTTTCCTTAACTTCTATTTCCTAGCCACCAACAACCCTTACACTATAAACTTGGGATTCATAGCCGCAGACACGCTTCAGAAATTGGTGATTCTCAGTGCTCTTTTTCTATGGTCTGCCTTCATAAAAGGTGGCAGCATCGACTGGACCATCACCCTCTTCTCACTTTCCACGCTGCCCAACACGGTGGTCGTGGGTGTGCCGCTTCTAACGGCCATGTACGGAGACTCAACAACCAGCCTCATGAGTCACATTTTCGTCATGCAGGGTGTGGTCTGGTTCACGCTCATGCTGTTCTTGTACGAATACAGAAGCGCCAGAAACCTTATTTCGAAGCAGTTCCCTCAAAACGGAGGCTCCATCGCCTCCTTCACCGTTGACTCTGACGTTATCTCGCTCAGCGAGAACGAGCCTCTGCAAACTGAAGCCGAAACGGGAGAAAACGGAGAGGTTCATGTGGTGCTGAAGAGCCCTTCCTTCAACAACTCTTGTAACTGTTCATCTTCCAATCGTTCTGCAACAGATATTTTCTCCATTCGAAGATCTATGAGTTTTAACACCACACGTGATCTCCGAGACCAGGGTTCTGAAAGAGGAATGTCCAAGATCTATGAACCAAACCAAGATGCAGTGAAAAATGAATTTATTGTGAATCTTAAAGCAATGGGAGACACAGAGGTTGAGAATGTGGATAGAATAAAACATCCTTTAAGCGAGGGCAAAAAAGAGGTGAAAAATGAAGAAGGAGGTGCATACAGTAAAAAGCAGCAAATGCCAGCAACTAGTGTGGTAACAAGGCTTGTTCTAACCATGGTTTGGAGGAATCTAGTTAGAAACCCTAATACCTATGCTTGTGCTACTGGACTCGCATGGTCTCTCATATCATTCAGGTGGAATATAAAATTTCCGTTGATGATAGATGGTTCCATTCTAATATTGGCAAAAACTGGGACAGGAACGGCCATGTTCAGTATGGGTTTATTCATGGCATTACAAACCAAAATCGTAGCTTGTGGAAACACTTGGGCAACAGTATCTATGGTGGCTCGATTCGTGGTTGGTCCAACAGTGATTGCTATAGCCGCCATAGCCATCGGTGTCCGAGGAGATCTTTTACGAATTGCCATTGTTCAAGCTGCTCTTCCCCAATCTGTCCTCTCTTTTGTATATGCCAAAGAGTACAATCACCACACAGACATAATAAGCACTGCGGTTATATTTGGAACGGTGATTTCGTTGCCCGTTACAATATTATACTACGTGCTGCTTGGACTCAATTAA 1434 0.4526 MINSQDIYNTLSALVPLYVPMILAYGSVRWWKIITPEQCTGINRFVAFFSAPFLNFYFLATNNPYTINLGFIAADTLQKLVILSALFLWSAFIKGGSIDWTITLFSLSTLPNTVVVGVPLLTAMYGDSTTSLMSHIFVMQGVVWFTLMLFLYEYRSARNLISKQFPQNGGSIASFTVDSDVISLSENEPLQTEAETGENGEVHVVLKSPSFNNSCNCSSSNRSATDIFSIRRSMSFNTTRDLRDQGSERGMSKIYEPNQDAVKNEFIVNLKAMGDTEVENVDRIKHPLSEGKKEVKNEEGGAYSKKQQMPATSVVTRLVLTMVWRNLVRNPNTYACATGLAWSLISFRWNIKFPLMIDGSILILAKTGTGTAMFSMGLFMALQTKIVACGNTWATVSMVARFVVGPTVIAIAAIAIGVRGDLLRIAIVQAALPQSVLSFVYAKEYNHHTDIISTAVIFGTVISLPVTILYYVLLGLN* 478
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2147 477 Pfam Membrane transport protein 12 471 IPR004776 GO:0016021|GO:0055085
Pvu9g2147 477 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 273 476 - -
Pvu9g2147 477 PANTHER AUXIN EFFLUX CARRIER COMPONENT 1B-RELATED 1 224 - -
Pvu9g2147 477 TIGRFAM 2a69: auxin efflux carrier 1 476 IPR014024 -
Pvu9g2147 477 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 1 224 IPR033526 GO:0010315|GO:0010329
Pvu9g2147 477 PANTHER AUXIN EFFLUX CARRIER COMPONENT 2 273 476 IPR033526 GO:0010315|GO:0010329
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2147 Pvu-Chr9 30810418 30815316 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2147 253 467 Organic Solute Cotransporters AT1G73590 48.611 1.02e-58 202
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2147 K13947 - gmx:100781239 650.973