Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2139 ATGGATTGTGGAAAAAATGTGGCTTCAAATTCATCAGGTTCTTATCGAGAGTTCACCAAGTGGACGACGGAGATGGACCTAATTTTGCTGAATGCAATGATTGACGAGGTACGAAAAGGGTGTAGAATTGATGGTAGCTGGACCACTCAAGGATACACTAACATAGTTATGGCTTTAAATGAGGTTGGTTTATCGGGTCTTAAGAAAAATAATGTGAAGAACCGGCAGAAAAGCCTGAAGGACAGTGGTTTCGCATGGAACCAGACCACCAAACTTTTTGAAGTCGAGGACGAAGTTTGGAGTGAGCTGATTAAGGCCAAACCATATGCGGCAAAATGGCGTTTCAATCCCATTCGCCATTATGACCTCATGGAGGAGTTGTGGTCTAATGATAGAGCCACGGGAAGTCGGGTCAGGACAGCCCATTACATCAATTCACCTCCTGACATGACCAATTTCAGTATGACATCATCATCCCACAAGCGTAACAGAACCCGTAAGGGTAAATCTCGAGTAGAAAATGTTGACGTTCCTCCTCCAGCAACGAGGATTCAAGAAGTTCTTGATTATTCAAGATACTTTAGTATCAGGCATCAAATGGTGGTTTTTGAAAAGAACTTTCACACAAGAGTAGTATTACCACCAAAAGTGATGCATACTCCATTTTTTGCTGGTCCAGGATTTGAATTCCAAAATCTTCTGAATTGGCAAGGTTTACAACCTTTCCTTGGAATTAATCTTCCGTATTATGAGGATTTGGTAAGAGTATTTTATACAAATGCAAAAATCACACCTTTTGGTCACCTTGCCATTGAGATTTGCGGAAGAATGATACACATTAAAGAAATGGATTGGATGACCATTGCTCATCTACAGTATGACGGTCTTAAGTTAACCCCTGGGACGATCCCTGAGGAACTGAATTTTGATCGAGCACTAGCATTATCGTCCATGATTCGTGAAGATGTTGAAGGTGAAAATCTCAAAAATGTCGGTAGTCTGAAAATGAATGACCGACTGTTGCATTACACATGGGTGCATATCTTGTGCCCTCGAGGAAGCAACTATGCACAACTACTGAATGAAGATATTTTCATGTTGTGGTTAATCAAGAATAATGTACGCATTAATTGGTCTCATTACATCATGCAACACATCGTCAAATGTCAGGATAACAAGATGCCTCTCCCATATGCAAATTTGATAACGAGGATCTTGCAGGTGTATGGCTTCGACTTGTCCAATGAACAAGAAATAATGCTAGGCTGGAATCATTACTTTGGCAAAAAAAGTATGAAAAAATTAAATATATTCCAGGTCAATGGCATATGGCAACTTGGTAGACCTCACCATGCACACAAAGAAGATGATGAAGAGGATGAATTGCCAGCACAAGATGTTCAAGGTGGTCAACCTGAGGAGGAAAACCCCACTCAAAGGGATTTGTTAACTCAAATTTTGTCCGGCATACAAAACATGAATACCGAATGGACAGAATTGAGGATACTCTGA 1512 0.4054 MDCGKNVASNSSGSYREFTKWTTEMDLILLNAMIDEVRKGCRIDGSWTTQGYTNIVMALNEVGLSGLKKNNVKNRQKSLKDSGFAWNQTTKLFEVEDEVWSELIKAKPYAAKWRFNPIRHYDLMEELWSNDRATGSRVRTAHYINSPPDMTNFSMTSSSHKRNRTRKGKSRVENVDVPPPATRIQEVLDYSRYFSIRHQMVVFEKNFHTRVVLPPKVMHTPFFAGPGFEFQNLLNWQGLQPFLGINLPYYEDLVRVFYTNAKITPFGHLAIEICGRMIHIKEMDWMTIAHLQYDGLKLTPGTIPEELNFDRALALSSMIREDVEGENLKNVGSLKMNDRLLHYTWVHILCPRGSNYAQLLNEDIFMLWLIKNNVRINWSHYIMQHIVKCQDNKMPLPYANLITRILQVYGFDLSNEQEIMLGWNHYFGKKSMKKLNIFQVNGIWQLGRPHHAHKEDDEEDELPAQDVQGGQPEEENPTQRDLLTQILSGIQNMNTEWTELRIL* 504
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2139 503 Pfam Myb/SANT-like DNA-binding domain 20 102 IPR024752 -
Pvu9g2139 503 MobiDBLite consensus disorder prediction 152 176 - -
Pvu9g2139 503 Pfam Putative plant transposon protein 240 407 IPR046796 -
Pvu9g2139 503 MobiDBLite consensus disorder prediction 449 479 - -
Pvu9g2139 503 PANTHER MYB/SANT-LIKE DNA-BINDING DOMAIN PROTEIN 9 385 - -
Pvu9g2139 503 PANTHER EXPRESSED PROTEIN 9 385 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2139 Pvu-Chr9 30688132 30690596 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2139 - - pvu:PHAVU_009G192600g 677.937