Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2138 ATGCCTGCCCTTGTCAATTATAGTGGTGATGATGAACTCTATCCTGGAGCTTCCTTTGGTCAAAATCTCATTGATTTGGGTCGCATGTGTACTTTGGGTTCAAGTGTGGAAGGGTACTACTGCACTCCTAACAAACGAGCACGCATCAATGCCCCGGATATTTTTGAAACTCTACGGCTCAGGAAAGATCAAAAGCCTGCCATTGAAGTCCTTCCTAATGAATGTCTTTTTGAGATTTTCAGACGGCTCTCTAGTGGCAAAGAGAGGAGCTCTTGTTCCTGTGTATCTAAGCGGTGGCTCATGCTTATGAGCAGGATCTGCAAAGCTGAAATTTACAAGTCCGAGAATTTGACTGAGGGATCTGCTTCCTGTGATGTTGAAATGGCCTCAGTGGATGAGGATCTGGTTATTGAAGATGATGGTTACTTATCGCGGTGTTTAGAAGGGAAGAAGGCAACTGATGTGAGGCTTGCTGCAATTGCAGTTGGGACTAGTGCTCGTGGAGGACTGGGAAAACTATCTATCAGAGGAAACAATTCTGCTCGCGGTGTCACAGATGTTGGTCTCTCAGCAGTTGCTCATGGTTGCCCTTCTCTTAGATCCTTTTCTTTGTGGAATGTTTCCTCTGTAGGGGATGAGGGTCTGTCCGAGATAGCAAAAGGATGCCATATGTTGGAGAAGCTTGACATCTGCCAGGCTTCCTCCATTAGCAACAAAAGTCTAATTGCAATAGCTAAGGGCTGCCCCAATTTGACCACCTTAAATATTGAATCGTGTCCAGAGATTGGAAACGAGGGGTTGCAAGCTATTGCAAGGTCTTGCCCCAAGTTAAAGTGCATCTCTATCAAGGATTGTCCTCTTGTTGGGGATCATGGAGTATCAAGTCTATTATCATCAGCTAATAACCTTTCAAGGTTAAAGCTTCAGGATTTAAACATTACAGATTTCTCTCTGGCTGTCATTGGCCATTACGGAAAGGCAATTGTAAATTTAGTGCTCACTAGTCTTCAAAATGTCACTGAAAGGGGGTTTTGGGTCATGGGTGTTGCTCATGGTCTGCAGAAGCTCATGTCACTTACAGTTTCTTCATGTCGAGGGGTAACAGATGCAAGCATTGAAGCCATAGGTAAAGGCTGCATCCACCTGAAGCAGATGCTTATGCGAAGATGCTGTTTAGTGTCTGATAAGGGCTTGGTAGCATTTGGCAAAGCTGCAAGTTCTCTTGAGAGCCTGCAGTTGGAGGAGTGTAACAGCATCACCCAGTTTGGGATTATTGGTGCCCTTTCAAACTTCAAAACAACATTGAAGTATCTCACCCTTCTTAAGTGTAAAGGAGTTAAAGATATAGATGCAGAAGTATCAATGCTTTCTCCTTGTGAGTCTCTCCAACATTTATCCATTCGTAACTGCCCTGGTGTTGGAAATGCTAGCCTGACTATGGTTGGCAAATTGTGTCCCCAACTTCAGTGCGTTGATCTGACTGGACTTTATGGTGTAACTGATGCTGGCCTTCTCCCTCTTCTAGAGAATTCTGAGGCTGGGCTGGTCAAGGTGAACCTTGCTGGCTGCGGGAATTTGTCAGACAACATAGTTTCAGAATTGGCCCGGCTACACGGTGGAACCCTTGAATTGCTAAATCTTGATGGATGCAGGAAGATTACCGATGCAAGCTTGGTTGCAATTGCAGATTACTGCCATCTGCTTAAAGATCTAGACGTGTCAAAGTGTGGAATCACCGATGCTGGAATAGCTGTTCTTTCTAATGCCAGGCAGCTCACTTTGCAAGTGCTTTCTTTGTCGAACTGTTCTGGTGTAACTTGCAAAAGTGGACCTTCCCTAACAAATTTAGGCCAGACCTTGGTTGGTTTGAATCTTCAGTATTGCAATTCAATTGGCAGCAACACAGTTGAGTTGCTAGTGGAGAACTTGTGGAGATGTGACATTCTGGCTTAA 1953 0.4465 MPALVNYSGDDELYPGASFGQNLIDLGRMCTLGSSVEGYYCTPNKRARINAPDIFETLRLRKDQKPAIEVLPNECLFEIFRRLSSGKERSSCSCVSKRWLMLMSRICKAEIYKSENLTEGSASCDVEMASVDEDLVIEDDGYLSRCLEGKKATDVRLAAIAVGTSARGGLGKLSIRGNNSARGVTDVGLSAVAHGCPSLRSFSLWNVSSVGDEGLSEIAKGCHMLEKLDICQASSISNKSLIAIAKGCPNLTTLNIESCPEIGNEGLQAIARSCPKLKCISIKDCPLVGDHGVSSLLSSANNLSRLKLQDLNITDFSLAVIGHYGKAIVNLVLTSLQNVTERGFWVMGVAHGLQKLMSLTVSSCRGVTDASIEAIGKGCIHLKQMLMRRCCLVSDKGLVAFGKAASSLESLQLEECNSITQFGIIGALSNFKTTLKYLTLLKCKGVKDIDAEVSMLSPCESLQHLSIRNCPGVGNASLTMVGKLCPQLQCVDLTGLYGVTDAGLLPLLENSEAGLVKVNLAGCGNLSDNIVSELARLHGGTLELLNLDGCRKITDASLVAIADYCHLLKDLDVSKCGITDAGIAVLSNARQLTLQVLSLSNCSGVTCKSGPSLTNLGQTLVGLNLQYCNSIGSNTVELLVENLWRCDILA* 651
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2138 650 Pfam F-box-like 69 100 IPR001810 GO:0005515
Pvu9g2138 650 Gene3D - 68 105 - -
Pvu9g2138 650 Gene3D Ribonuclease Inhibitor 454 512 IPR032675 -
Pvu9g2138 650 Gene3D Ribonuclease Inhibitor 144 345 IPR032675 -
Pvu9g2138 650 Gene3D Ribonuclease Inhibitor 513 646 IPR032675 -
Pvu9g2138 650 Gene3D Ribonuclease Inhibitor 346 453 IPR032675 -
Pvu9g2138 650 PANTHER UNCHARACTERIZED 17 641 - -
Pvu9g2138 650 PANTHER GRR1 17 641 - -
Pvu9g2138 650 Pfam Leucine Rich repeat 565 586 IPR001611 GO:0005515
Pvu9g2138 650 Pfam Leucine Rich repeat 248 271 IPR001611 GO:0005515
Pvu9g2138 650 SMART fbox_2 71 112 IPR001810 GO:0005515
Pvu9g2138 650 SUPERFAMILY F-box domain 64 108 IPR036047 GO:0005515
Pvu9g2138 650 SMART LRR_CC_2 222 247 IPR006553 -
Pvu9g2138 650 SMART LRR_CC_2 591 619 IPR006553 -
Pvu9g2138 650 SMART LRR_CC_2 485 510 IPR006553 -
Pvu9g2138 650 SMART LRR_CC_2 274 299 IPR006553 -
Pvu9g2138 650 SMART LRR_CC_2 459 484 IPR006553 -
Pvu9g2138 650 SMART LRR_CC_2 539 564 IPR006553 -
Pvu9g2138 650 SMART LRR_CC_2 248 273 IPR006553 -
Pvu9g2138 650 SMART LRR_CC_2 405 430 IPR006553 -
Pvu9g2138 650 SMART LRR_CC_2 512 537 IPR006553 -
Pvu9g2138 650 SMART LRR_CC_2 379 404 IPR006553 -
Pvu9g2138 650 SMART LRR_CC_2 196 221 IPR006553 -
Pvu9g2138 650 SMART LRR_CC_2 565 589 IPR006553 -
Pvu9g2138 650 SMART LRR_CC_2 353 378 IPR006553 -
Pvu9g2138 650 SUPERFAMILY RNI-like 182 424 - -
Pvu9g2138 650 SUPERFAMILY RNI-like 349 606 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2138 Pvu-Chr9 30672689 30675626 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2138 K14515 - gmx:100792339 1073.54