Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2117 ATGGCGAGCTTAGTGGAGCAAGAGGGTGATGCTAGTGAGGGAACTTACACTTTGGAGCTGCCTGCTCCACCTGGTTGGAAGAAGAAGTTCATCCCAAAGAAAACTGGGACTCCAAAAAAAAATGAGATTGTGTTCACTTCACCAACAGGAGAGGAGATCAATAACAGGAAGCAGTTGGAAAAATATTTGAAAGCACACCCTGGTGGTCCAGATGTATCAGAATTTGATTGGGGCACTGGTGAGACCCCAAGAAGGTCTGCAAGAATCAGTGAGAAGGCCAAGGCAGTGTCTCCAACAGAAAGCGAACCCCCAAAGAAACGTAGTAAAAGAACACCAGCTTCACAAAAAGAAACTTTTCAGGAAGAAAAAGAAGAGGACACAAAGGAAACGGATATGCAAGCAGCTGATGATATCACCAAGGTTGATGAAGATATAGAGAAGGAAAAGAATGCGGTAACGGAAAATCAAGATGACAAGAGTGCGGAGGATACAAATATCAACAAATCAACTCATCCTGGAGATGCTAAAGCTGGAGAAAATATTAATGACGAGGAAAAATCCAATGCTGATGGAGAACTACACGCATTGGAAGATAAAGTTGTTAACAAAGGAACTGAGGGTGCTGAAGTTTCTCTGAGAAAAGATGAAGAAAAGATTGGGCAACCACACGAAGAGAGAAAAGAATATCACAGATCTGGGGAGCCAGAGAAATCTGAAACATGCACTACTGCTGACAAAACAGTTGAAGTGGAAGGTGTGAACAAAGAGGAATACATCAAGAGTACTAGTAAACTTGAAGAAGTTGAGAAAATAGAAGGAACAATAGTGAATAGTGAAGAACATGAGAAGCTTGATGAGATAAATAAGAAGGTTGAAGCTGAGTTGACTGAGAATGGAAATCATGGGAGTTGA 912 0.4145 MASLVEQEGDASEGTYTLELPAPPGWKKKFIPKKTGTPKKNEIVFTSPTGEEINNRKQLEKYLKAHPGGPDVSEFDWGTGETPRRSARISEKAKAVSPTESEPPKKRSKRTPASQKETFQEEKEEDTKETDMQAADDITKVDEDIEKEKNAVTENQDDKSAEDTNINKSTHPGDAKAGENINDEEKSNADGELHALEDKVVNKGTEGAEVSLRKDEEKIGQPHEERKEYHRSGEPEKSETCTTADKTVEVEGVNKEEYIKSTSKLEEVEKIEGTIVNSEEHEKLDEINKKVEAELTENGNHGS* 304
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2117 303 MobiDBLite consensus disorder prediction 177 245 - -
Pvu9g2117 303 MobiDBLite consensus disorder prediction 64 245 - -
Pvu9g2117 303 SUPERFAMILY DNA-binding domain 13 109 IPR016177 GO:0003677
Pvu9g2117 303 Gene3D - 5 137 - -
Pvu9g2117 303 MobiDBLite consensus disorder prediction 1 52 - -
Pvu9g2117 303 ProSiteProfiles Methyl-CpG-binding domain (MBD) profile. 12 82 IPR001739 GO:0003677
Pvu9g2117 303 PANTHER METHYL-CPG-BINDING DOMAIN-CONTAINING PROTEIN 11-LIKE 10 302 - -
Pvu9g2117 303 MobiDBLite consensus disorder prediction 98 165 - -
Pvu9g2117 303 PANTHER METHYL-CPG BINDING DOMAIN CONTAINING PROTEIN, EXPRESSED 10 302 IPR039622 -
Pvu9g2117 303 Pfam Methyl-CpG binding domain 18 81 IPR001739 GO:0003677
Pvu9g2117 303 CDD MeCP2_MBD 21 85 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2117 Pvu-Chr9 30332506 30338436 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2117 - - gmx:100814375 434.491