Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2113 ATGGGAATCCCTGGATTGAGCAATCAGAATAATGGGCAGCAAAGATTAGGCATAACTGAGCCTATTTCATTGGCTGGACCAACTGAGGATGATGTGATCAAGACGCGAGAACTTGAGAAGTACTTGCAAGGTGTTGGATTGTACGAGAGTCAGGAGGAGGCTGTGGGTAGGGAGGAAATTCTTGGCAGGCTGGACCAGATTGTGAAGATTTGGGTTAAGAACATCAGCCGAGGAAAGGGGTTCAATGAACAACTGGTGCAAGAAGCAAATGCCAAGATTTTCACCTTTGGCTCTTATCGATTGGGGGTGCATGGCCCTGGAGCTGATATAGATACTCTTTGTGTGGGACCTAGACATGCAACCAGAGATGAAGATTTCTTTGGGGAGCTATGGAAGATGCTATCTGAGATGCAAGAAGTAACAGAGTTGCACCCTGTGCCCGATGCTCATGTCCCTGTAATGAAATTCAAGTTTAATGGAATTTCTGTCGATCTCCTGTATGCTAGATTAGCTTTGTGGGTTATTCCTGAAGACTTAGATATATCACAGGAATCAATATTACAAAATGTTGACGAACAAACTGTTCGTAGTCTTAATGGTTGTAGAGTAACTGATCTGGTCCTGCGATTGGTTCCAAATATTCAGACTTTTCGCACAACATTGAGGTGCATGAGGTTTTGGGCAAAACGTCGTGGTGTTTATTCAAATGTTGCTGGTTTTCTTGGTGGTATAAATCTGGCATTGCTTGTTGCTCGAATATGCCAGTTATATCCTAATGCACTACCTAATATGTTAGTGTCTCGATTCTTTAGGGTATATACTCAATGGCGATGGCCAAATCCAGTCATGCTTTGTGCTATTGAAGAAGGATCTCTTGGACTACCAGTTTGGGATCCTAGAAGAAATCCCAAGGATAGATATCATCTAATGCCTATAATTACCCCTGCTTATCCTTGCATGAATTCTACATACAATGTGACATCAAGTACATTGCGTGTTATGTCAGATGAGTTTGGGAGGGGAAGTGAAATGTGTGAGGCTATGGAGGCTAGCAAGGCCGATTGGGATACTCTTTTTGAGCCTTGTCCCTTTTTTGAATCTTACAAGAATTATCTACAGATAGACATAACAGCAGAGAATTCAGATGACCTCCGACAATGGAAAGGCTGGGTTGAATCTCGTCTCCGCCAATTAACATTGAAGATTGAGAGGCACACTTATGGTATGCTTCAATGCCATCCACATCCTGGTGAATTCTCAGACAAATCTAGACCTTTTCATCACAGTTACTTCATGGGTCTGCAGCGTAAGCAAGGAGTTCCAGTGAATGAAGGTGAACAGTTTGATATAAGGCTAACTGTTGAAGAATTCAAGCATTCTGTTAATGCTTACACACTATGGAAAACTGGAATGGATATCCATGTGTCTCATGTGAAACGCCGCAACATACCTACATACATATTCCCTGGTGGTGTCCGACCTTCCTGCCCAGCAAGGAGCTGCAAGTTGGAGTCTCAAGGAGGTAAAGGAGCTGCAGTTGGAGCAGATGATATGAAGAAGAGAAGGAAATCAGAGGATGACGTGGATAATAATTCAAAGAATTCCAAGTCCCCTGTATCTTCACCTCTCCCCAGCAGGGAAGTTTATGAAGATACGACTCCTATTAAATTGGATGAATCAGAAGTCAATGGTATTGACGGACAAAAGAGCAAGAAACTTTGTCTGAGATCTCCAGGGGAGATTCCTTCTGGGGATAGTGAAACCAATGGATTTGTAACAACCAACCAACTAGTGAACCCTATTATTGCTGCTACTGATACATCTAGTTCTAAAGAAGAAGAAAACCTAGCCATTGAAAAGATTATGTCCGGTCCTTATGATGCACATAAATCCTTTCCAGAAGAACCTGAAGAGCTTGAAGATGACACTCGGTATAGAAATCAAGTCAAAGATACTGGTGGGAACATAAAAAATAACGTAACTGAATCTTTAGTCCCAAAGCCTGGAGTGGCAGAAGAGCCAATTGTTTATATGGAAACTAGTTCAACTCGTTTATGCTCCTCTGAGGGATTGGAGGAGCTTGAGCCCGCTGAGCTAACAGCACCATTGTTAACCGTGCCTCCTGCTCCTGCACTGAAGAAGCCTCTTATCAGGTTGAACTTCACTTCCTTAGGAAAAGCTGCTGACAAGAGTTCTTAG 2199 0.427 MGIPGLSNQNNGQQRLGITEPISLAGPTEDDVIKTRELEKYLQGVGLYESQEEAVGREEILGRLDQIVKIWVKNISRGKGFNEQLVQEANAKIFTFGSYRLGVHGPGADIDTLCVGPRHATRDEDFFGELWKMLSEMQEVTELHPVPDAHVPVMKFKFNGISVDLLYARLALWVIPEDLDISQESILQNVDEQTVRSLNGCRVTDLVLRLVPNIQTFRTTLRCMRFWAKRRGVYSNVAGFLGGINLALLVARICQLYPNALPNMLVSRFFRVYTQWRWPNPVMLCAIEEGSLGLPVWDPRRNPKDRYHLMPIITPAYPCMNSTYNVTSSTLRVMSDEFGRGSEMCEAMEASKADWDTLFEPCPFFESYKNYLQIDITAENSDDLRQWKGWVESRLRQLTLKIERHTYGMLQCHPHPGEFSDKSRPFHHSYFMGLQRKQGVPVNEGEQFDIRLTVEEFKHSVNAYTLWKTGMDIHVSHVKRRNIPTYIFPGGVRPSCPARSCKLESQGGKGAAVGADDMKKRRKSEDDVDNNSKNSKSPVSSPLPSREVYEDTTPIKLDESEVNGIDGQKSKKLCLRSPGEIPSGDSETNGFVTTNQLVNPIIAATDTSSSKEEENLAIEKIMSGPYDAHKSFPEEPEELEDDTRYRNQVKDTGGNIKNNVTESLVPKPGVAEEPIVYMETSSTRLCSSEGLEELEPAELTAPLLTVPPAPALKKPLIRLNFTSLGKAADKSS* 733
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2113 732 Pfam Nucleotidyltransferase domain 82 165 IPR002934 GO:0016779
Pvu9g2113 732 Gene3D - 17 359 - -
Pvu9g2113 732 MobiDBLite consensus disorder prediction 569 591 - -
Pvu9g2113 732 PANTHER POLY(A) POLYMERASE-LIKE PROTEIN 1 661 - -
Pvu9g2113 732 SUPERFAMILY PAP/Archaeal CCA-adding enzyme, C-terminal domain 363 488 IPR011068 GO:0003723|GO:0016779|GO:0031123
Pvu9g2113 732 Gene3D Poly(A) polymerase predicted RNA binding domain 363 478 - -
Pvu9g2113 732 MobiDBLite consensus disorder prediction 499 548 - -
Pvu9g2113 732 Pfam Poly(A) polymerase predicted RNA binding domain 364 422 IPR007010 GO:0003723|GO:0043631
Pvu9g2113 732 MobiDBLite consensus disorder prediction 1 18 - -
Pvu9g2113 732 SUPERFAMILY PAP/OAS1 substrate-binding domain 212 361 - -
Pvu9g2113 732 CDD NT_PAP_TUTase 57 211 - -
Pvu9g2113 732 Pfam Poly(A) polymerase central domain 17 361 IPR007012 GO:0004652|GO:0043631
Pvu9g2113 732 PANTHER POLY A POLYMERASE 1 661 - -
Pvu9g2113 732 MobiDBLite consensus disorder prediction 1 21 - -
Pvu9g2113 732 SUPERFAMILY Nucleotidyltransferase 17 210 IPR043519 -
Pvu9g2113 732 Gene3D Beta Polymerase, domain 2 49 205 IPR043519 -
Pvu9g2113 732 MobiDBLite consensus disorder prediction 514 532 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2113 Pvu-Chr9 30294751 30301255 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2113 K14376 - gmx:100816915 1228