Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2101 ATGCCAGAGAGCAACCATAAGGAAATCCAAATCCGCGCCCTAACTGGCGAATCAATCACTCTTCCCGTCACCCCCACCACAACCCTCCACCACCTCAAGCTTCTCCTCCGCCAATCATTTCCCCCGGCCACCACCTCCCCCAATTTCCACCTCTTTTTCAAGGGTGACAAATTGCGATTGCACACTCAAATTGCCTCTTACCCCATCCAACACAACGAGTTTCTCGTCCTCATTCCGTTTACCAAAAAGGAAAAGGAACCTTCTACAACATCCGACTCTCTTCAGCCTAATGTTCCTCACACTACCAATGCTTCAGGTTCAACCTCTGATCTCGCGGATTCTACGTGGTCCTCCATAAAGGAGGATTTATCACTTTTACGCGACGCTACTGAGAATAATGCGTCTAATTCCGAGTTAGGAAAAGAAAAATCGTTGGAGACCTCAACCGAAGGGGCTTTAGGTTCTGCGAAGCAGATAGAGCTTCCGTATCATCTCATACTGAACACATTGAGGGACACTAGCGATGGTCCTCTTGGCGAGCACAATTGCGAGGTTTTCGTCAAGGTTTTGGAGTCCGTCAATTGTTTATCGGAACTGCCGTTCGGACACTGCAAGTTGCTGAAAAGAGCTCGTTCGAAAGGAGGTGGTGGCGGCGGCCTGAGAAAACGTGTCAGTGACGGTGCTATATGTTTGTGTCCACCGTGGTTGAAGATACTGGTGAAGGCGTTTGCATTTGTGAACATCTTTTCCGCGTTTATTTATATGCAGCTTAGAGATTTGACCTCGATTCTGCTTGAGGAGGCGCTTAGTGAGCTTGCTAAGTTTGGGGTTAAACTTGGCCTCGGTGACATTAAGAATCTTTCGCTTCTTTGTCCACATTTGGTATGTTTCAGGGATGATGTAGAGAAGACAAGTTTTGATGATATCATTGTTATCCTTAATCATTCAACAGGCAATGATGATCTAGTTGAAGACAATCCTAAAAGAGTGCGCAAGTGGTTGTATGTTTCAAAGACTGTCAGTACATTGAAGAGAAGGGACAGTTCTTTCCGTAAAATTCTAGGGTGGGCTTTTGAACAACTACCGTACGAATTTGGAGATGAGATGACTGTGGGGATTTCCTTGGAAGAGTTGCTTGCAGCAGTCAAGGATGATGATTTTGTCAAAAAAGAAGACAAATCAAAACGTGTAAAGAGAAGAAAAACTACCTCAAAATCTGACTTAAACCATATTGGGTGTCATGACACAAAGTCATTACTGGCTGTGGAGATGATTGATCATCTTAAGAAAGGAATTGGATCAGAAGGGCAGATTGTGCACATTGAAGACATATGTGCCAGAAAAGCGATTTACAGTAAGAACCATATTGATCTATCAGAGAAAATGAGATCTGCACTGAAGTGTATTGGGGTTTCCAAATTTTACAGTCACCAGGCAGAGTCTATACAAGCTTCCCTTCATGGTGAAAATGTTGTTGTGGCTACAATGACATCTAGTGGCAAATCCCTTTGCTATAATCTACCAGTCCTAGAAGTGTTGTCCATGAATTCATCTTCATGTGCTTTGTACATATTTCCCACAAAGGCATTAGCTCAAGATCAACTAAGAGCGTTGTTACACATGACAAAAGGATTTGATAATGACTTTAATATTGGTATATATGATGGTGATACTTCTCACAGTGAGAGGATGTGGCTCCGTGATAATTCTAGATTGTTGATCACAAATCCAGATATGTTACACATATCAATCTTGCCCCATCATCAACAGTTTAGTCGGATTTTATCAAACCTAAGGTTTGTGGTAATTGATGAAAGTCATACTTACAAGGGAACATTTGGAAGTCACACTGCCCTTATCTTGAGGAGGCTAAAACGACTCTGTTCACATGTATATGGATCTGTTCCTTCTTTTGTTTTTTCTACTGCAACTTCTGCAAATCCTCGGGAGCATTCTATGGAACTTGCAAATTTATCTACGCTGGAGCTATTTCAGAATGATGGAAGTCCATCTACAAGGAAACTTTTTGTCCTTTGGAACCCTGCTTTGCGTCCAAAAGCTATCATTAAAAAAACTCAGTTTGCTATGGGTACTGATGAGTTGGCTGATGAAAGTGCTAATTTTGTTCGTTCAAGCCCAATTGTGGATGTTTCACGTCTTTTTGCAGAAATGGTTCAGCATGGTCTTCGCTGTATTGCATTTTGTAAATCACGGAAACTTTGTGAGCTTGTTTTATCCTACACCCGTGAGATTCTTCATGAGACAGCCCCGTGGCTGGTGGATTCGATATGTGCATATCGTGGTGGCTACATCGCAGAGGAAAGAAGAAAAATAGAGAGTTCATTTTTTGGTGGTAAAATACGTGGTGTTGCGGCAACTAATGCTCTTGAGTTGGGCATTGATGTTGGAGAAATTGATGCCACTCTGCATCTAGGATTTCCTGGTAGTATTGCAAGCATGTGGCAACAAGCTGGTAGAGGTGGGAGGAGAGATAAACCATCTCTTGCTGTCTATGTTGCATTCGGGGGCCCTCTGGATCAATACTTCATGACACATCCCAATAAACTTTTTGAAAGACCAATTGAATGTTGTCATGTTGATTCTCAAAACAAGAAGATTCTTGAGCAACATTTGGTCTGTGCTGCTCATGAATACCCTCTATGTGTGAACTACGATGAACAATATTTTGGTCCTTGCTTGGAGGGTGTAATAATTTCTCTAAAAACTAGAGGATACTTGAGTTCTGTTCTATCTTCTGATTCTTCTACAATATGGAACTACATTGGCCCTGAGAAATTACCCTCACATGCAGTCAATATCCGAGCAATAGAAAATGTAAGATACAGTGTCATAGATCAGAAAAAAAATGAAGTCCTTGAAGAGATAGAGGAAAGCAAGGCATTCTTTCAGGTATATGAAGGTGCTGTGTATATGTGCCAGGGGAAAACCTATTTGGTTGAAAAATTAGATCTATCTAATAAAACTGCTTTCTGCAAAGAGGCTGATCTAAAGTATTATACAAAGACTCGAGATTACACTGATATTCATGTCATTGGGGGTAATGTTGCCTATCCACTCAAGGTAGAAACCAACATGTTTCCAAAATCAAATGCCCGGGCTGATGTATGCAAAGTAACAACTACTTGGTTTGGTTTTTATCGTATTTGGAGAGGAAGCAATCAAATCTTTGATACTGTTGACCTCGCACTTCCTCATTACTCATACGAGTCACAGGCAGTTTGGGTTCCTGTGCCACTGTCAATAAAAGAAGCAGTAGTCAAGCAAAATTTTGATTTCCGTGGAGGTCTGCATGCTGCTTCACATGCAATTTTACACGTAGTGCCTTTACATATCACATGCAACTTGTCTGACTTGGCTCCTGAATGTCCAAACCCTCATGATACCCGATTTTACCCGGAAAGAATTCTAATATATGATCAACATCCCGGAGGATGTGGAATTTCAGTACAGGTTCAACCCTATTTTACAAAGTTCCTGGAAGCCGCACTAGAGCTTCTCACATGTTGCTGCTGCTCAGCGGAAGTGGGTTGCCCTAATTGTGTTCAGAGCTTTGTTTGCCATGAATATAACGAGGTTTTGCACAAGGATGCAGCCATCATGATTATTAAGGGTATTCTGGAGGCGGGAAACTAG 3654 0.4184 MPESNHKEIQIRALTGESITLPVTPTTTLHHLKLLLRQSFPPATTSPNFHLFFKGDKLRLHTQIASYPIQHNEFLVLIPFTKKEKEPSTTSDSLQPNVPHTTNASGSTSDLADSTWSSIKEDLSLLRDATENNASNSELGKEKSLETSTEGALGSAKQIELPYHLILNTLRDTSDGPLGEHNCEVFVKVLESVNCLSELPFGHCKLLKRARSKGGGGGGLRKRVSDGAICLCPPWLKILVKAFAFVNIFSAFIYMQLRDLTSILLEEALSELAKFGVKLGLGDIKNLSLLCPHLVCFRDDVEKTSFDDIIVILNHSTGNDDLVEDNPKRVRKWLYVSKTVSTLKRRDSSFRKILGWAFEQLPYEFGDEMTVGISLEELLAAVKDDDFVKKEDKSKRVKRRKTTSKSDLNHIGCHDTKSLLAVEMIDHLKKGIGSEGQIVHIEDICARKAIYSKNHIDLSEKMRSALKCIGVSKFYSHQAESIQASLHGENVVVATMTSSGKSLCYNLPVLEVLSMNSSSCALYIFPTKALAQDQLRALLHMTKGFDNDFNIGIYDGDTSHSERMWLRDNSRLLITNPDMLHISILPHHQQFSRILSNLRFVVIDESHTYKGTFGSHTALILRRLKRLCSHVYGSVPSFVFSTATSANPREHSMELANLSTLELFQNDGSPSTRKLFVLWNPALRPKAIIKKTQFAMGTDELADESANFVRSSPIVDVSRLFAEMVQHGLRCIAFCKSRKLCELVLSYTREILHETAPWLVDSICAYRGGYIAEERRKIESSFFGGKIRGVAATNALELGIDVGEIDATLHLGFPGSIASMWQQAGRGGRRDKPSLAVYVAFGGPLDQYFMTHPNKLFERPIECCHVDSQNKKILEQHLVCAAHEYPLCVNYDEQYFGPCLEGVIISLKTRGYLSSVLSSDSSTIWNYIGPEKLPSHAVNIRAIENVRYSVIDQKKNEVLEEIEESKAFFQVYEGAVYMCQGKTYLVEKLDLSNKTAFCKEADLKYYTKTRDYTDIHVIGGNVAYPLKVETNMFPKSNARADVCKVTTTWFGFYRIWRGSNQIFDTVDLALPHYSYESQAVWVPVPLSIKEAVVKQNFDFRGGLHAASHAILHVVPLHITCNLSDLAPECPNPHDTRFYPERILIYDQHPGGCGISVQVQPYFTKFLEAALELLTCCCCSAEVGCPNCVQSFVCHEYNEVLHKDAAIMIIKGILEAGN* 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2101 1217 CDD DEXHc_Hrq1-like 474 655 - -
Pvu9g2101 1217 Pfam MrfA Zn-binding domain 1106 1188 IPR018973 -
Pvu9g2101 1217 MobiDBLite consensus disorder prediction 86 113 - -
Pvu9g2101 1217 MobiDBLite consensus disorder prediction 90 113 - -
Pvu9g2101 1217 Gene3D - 8 99 - -
Pvu9g2101 1217 ProSiteProfiles Superfamilies 1 and 2 helicase C-terminal domain profile. 716 874 IPR001650 -
Pvu9g2101 1217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 521 849 IPR027417 -
Pvu9g2101 1217 CDD SF2_C_Hrq 676 840 - -
Pvu9g2101 1217 Pfam DEAD/DEAH box helicase 476 645 IPR011545 GO:0003676|GO:0005524
Pvu9g2101 1217 Gene3D - 446 665 IPR027417 -
Pvu9g2101 1217 Pfam Helicase conserved C-terminal domain 723 829 IPR001650 -
Pvu9g2101 1217 Gene3D - 709 883 IPR027417 -
Pvu9g2101 1217 ProSiteProfiles Ubiquitin domain profile. 7 78 IPR000626 GO:0005515
Pvu9g2101 1217 PANTHER ATP-DEPENDENT HELICASE HRQ1 21 1215 - -
Pvu9g2101 1217 SMART ultradead3 470 676 IPR014001 -
Pvu9g2101 1217 SMART helicmild6 750 831 IPR001650 -
Pvu9g2101 1217 ProSiteProfiles Superfamilies 1 and 2 helicase ATP-binding type-1 domain profile. 482 663 IPR014001 -
Pvu9g2101 1217 SUPERFAMILY Ubiquitin-like 4 90 IPR029071 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2101 - - gmx:100819522 2071.97
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2101 9 30113415 30126226 Pvu9g2101 9 30113415 30126226 ECH