Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2100 ATGTCAAGTTATTGCAAAGGTAAACGCTCGTGGCCGGAATTGGTTGGCATAAATGGAGAAACAGCAACACAAATCATCGTGAAGGAAAACCCAAGAGTGGAGGCTTTAACTGTGCCAGAAGGATCATTTGTGTCCACTGATTTTAGGTGTGACAGGGTTCGAGTATTTGTTAACTATAAGAACACTGTCACTCGTGTGCCCAACATTGGTTAA 213 0.4272 MSSYCKGKRSWPELVGINGETATQIIVKENPRVEALTVPEGSFVSTDFRCDRVRVFVNYKNTVTRVPNIG* 71
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2100 70 SUPERFAMILY CI-2 family of serine protease inhibitors 4 70 IPR036354 -
Pvu9g2100 70 Pfam Potato inhibitor I family 8 70 IPR000864 GO:0004867|GO:0009611
Pvu9g2100 70 Gene3D Trypsin Inhibitor V, subunit A 1 69 - -
Pvu9g2100 70 PANTHER PROTEIN, PUTATIVE, EXPRESSED-RELATED 1 70 IPR000864 GO:0004867|GO:0009611
Pvu9g2100 70 ProSitePatterns Potato inhibitor I family signature. 11 22 IPR000864 GO:0004867|GO:0009611
Pvu9g2100 70 PANTHER S.GRISEUS PROTEASE INHIBITOR, PUTATIVE-RELATED 1 70 - -
Pvu9g2100 70 PRINTS Potato inhibitor I signature 10 23 IPR000864 GO:0004867|GO:0009611
Pvu9g2100 70 PRINTS Potato inhibitor I signature 35 46 IPR000864 GO:0004867|GO:0009611
Pvu9g2100 70 PRINTS Potato inhibitor I signature 47 57 IPR000864 GO:0004867|GO:0009611
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2100 Pvu-Chr9 30109114 30109509 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2100 - - mtr:MTR_5g045470 94.7449