Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2088 ATGGATGTAGTAAATGATTTGCATATGGGTGGTTCAACTAGTACGGAGGATGTAAATTTGTCACAGAAGCGGAAAATGCCAAAAAGGAAGAAGCAAGGTAATGCTGTTGAGTGTGAAGGTCCTGATTTTTCACTGGATAATTCTTCACCGAAGATGGATGCTACTATAAATCACCCATTAGATGAGTCCCCAGCTTTGCCTAATTTCTTAAGTTGCCAAATAATTGTAGAATTTAATTCGACAAAGCAGAATGAGAAGGGTAAACGGAAGAAGACAACACATAATCCTATTGAAGGCAATAATAGCAGTTGTGGCACTTCAGAGAATACTTTTTCATCAAAAGCTTCCACACCTGCATTGGATATGCTGTCAGGACTTCCAATTCAATGTTTTTCTACTGATCCAATAACAAGTCAATCTTGTGAGGAATTGGGTTTTTGTCAGGGAGATGATGAAGAAAAGGAGCAGAAGATGATCGATACAACTGCAGCAAAAGCTTCCTCACCTGCAATGGATATGCTGTCAGGACATCCCATTCAATGTTTTTCCTCTGATCCAATAACAAGTCAATCTTATGAGGAAGCAGGTTTTTGCCAGGGAGATCATGAAGAAAAGGAGCAGAAGATGATCAATACAACTGCAGAAAAGCATCATAATGTTCCAGAAGTAAGCGGCAACCACATTTTTGTTGCAGCAAGTCCTGAGCCTTTTGCAAAAAAGTGTGTGCCAGAAGTTGTAAAATTTAATATAGAGCATAGCATAAATGATAACATTTCCAACCTGGAGGATAAGAATAGTTTTGTAAATGATACAAGTCTGATGAAGGAAGATGTTGATGACCCAGCAGATTATGATTTGTCTGATAAAAGCATGTGTTACAAAGCCTGTCAAAGGAGACAAATGGTTAATGCTGATTGTAGAAGCAGTGGTTACCCTAGTCCTGAAAGTCCTAACAACGAACCGACTTTTCAGGATCATGACAAAGATGATTCACACAAATTTTCTGATGGATCATTGAGAGTTGGCTTGATGGGTGTAGAAACAAAACTTTCAATTGATCAAGTTGCCTCACATAGTGGAGATGCAGCTGAGGGAATAAAGTTGAGCACTGACATCATTAATGAGCAAAGGTTTATGACTAATTCTATTGTAGACATTCCTGTGGAGCATCTCAAAGCAGATGGTAGACAACTGGATAATACAGAGATTACAAGAAGCGATCTGTGTTGTGCAGGTGAGCAAATAGAGTTGAACACTGAGAACATTAATGAGCAAAGATCTATGACTACCTCATCTGCAGTTGACATTCATGTGGAGCAACGTGAAACAAATGGTAGACAGTTAGATCATGCGGAGATTACAAGAAATGATCTGTGTTGTGCAGACAGAAGTGTTTCTGGCAACCGAAAGAAGAAGCTTCTCATCCTTGATGTGAATGGACTACTTGCTGATTTTGTCAGTGTTAATGTCACTCGTACAAGATATAGACGAGAACCAGAGCCAGACTTTGTGTTGAAAGGGAAAAAAGTCTACAAGAGGCCCTTTTGTGAGGATTTTCTACAGTTTTGCTTTGACAGATTTCATGTAGGAGTATGGTCTTCTAGAGCCAAGAGCAATGTTCATGAAGCAATCAAATTTCTCTTGGGGAAATCTGCATCCAAACTGCTCTTTTGTTGGAATCAGTCCCACTGTACTACAACTGAATTCACTACTGTTGAGAATATATACAAGCCCCTTGTATTGAAGGAACTTAGAAAGTTGTGGGAAAAGGAAGAACCCGATCTACCATGGGAGAAGGGAGAGTTTAACGAGTCGAACACATTATTATTAGATGACTCCCCTTACAAGGCACTAATGAATCCTATGCATTCAGCGATATTTCCTTATTCTTACCTGTACTACAACACCAGAGACTCAGAATTAGGACCAGGAGGTGATCTTCGGGTTTATCTAGAAGGGCTGGCTGTGGCTGAGAATGTGAGAAACTACGTGTCAGAAAATCCTTTCGGCCAACGGCCGATAAGAGAAGCAAATCCATCCTGGGGTTACTACCGTAGAGTTATAGAATCAGTTCAAAGAAGCCAAAAGGCTAGGCCTTCATCAACCGGGTAG 2112 0.401 MDVVNDLHMGGSTSTEDVNLSQKRKMPKRKKQGNAVECEGPDFSLDNSSPKMDATINHPLDESPALPNFLSCQIIVEFNSTKQNEKGKRKKTTHNPIEGNNSSCGTSENTFSSKASTPALDMLSGLPIQCFSTDPITSQSCEELGFCQGDDEEKEQKMIDTTAAKASSPAMDMLSGHPIQCFSSDPITSQSYEEAGFCQGDHEEKEQKMINTTAEKHHNVPEVSGNHIFVAASPEPFAKKCVPEVVKFNIEHSINDNISNLEDKNSFVNDTSLMKEDVDDPADYDLSDKSMCYKACQRRQMVNADCRSSGYPSPESPNNEPTFQDHDKDDSHKFSDGSLRVGLMGVETKLSIDQVASHSGDAAEGIKLSTDIINEQRFMTNSIVDIPVEHLKADGRQLDNTEITRSDLCCAGEQIELNTENINEQRSMTTSSAVDIHVEQRETNGRQLDHAEITRNDLCCADRSVSGNRKKKLLILDVNGLLADFVSVNVTRTRYRREPEPDFVLKGKKVYKRPFCEDFLQFCFDRFHVGVWSSRAKSNVHEAIKFLLGKSASKLLFCWNQSHCTTTEFTTVENIYKPLVLKELRKLWEKEEPDLPWEKGEFNESNTLLLDDSPYKALMNPMHSAIFPYSYLYYNTRDSELGPGGDLRVYLEGLAVAENVRNYVSENPFGQRPIREANPSWGYYRRVIESVQRSQKARPSSTG* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2088 703 SMART forpap2 470 636 IPR004274 -
Pvu9g2088 703 MobiDBLite consensus disorder prediction 305 336 - -
Pvu9g2088 703 MobiDBLite consensus disorder prediction 96 112 - -
Pvu9g2088 703 ProSiteProfiles FCP1 homology domain profile. 467 654 IPR004274 -
Pvu9g2088 703 SUPERFAMILY HAD-like 468 663 IPR036412 -
Pvu9g2088 703 PANTHER HALOACID DEHALOGENASE-LIKE HYDROLASE (HAD) SUPERFAMILY PROTEIN 125 696 - -
Pvu9g2088 703 MobiDBLite consensus disorder prediction 83 112 - -
Pvu9g2088 703 Pfam NLI interacting factor-like phosphatase 472 661 IPR004274 -
Pvu9g2088 703 MobiDBLite consensus disorder prediction 305 320 - -
Pvu9g2088 703 MobiDBLite consensus disorder prediction 321 336 - -
Pvu9g2088 703 PANTHER NUCLEAR LIM INTERACTOR-INTERACTING FACTOR-RELATED 125 696 - -
Pvu9g2088 703 MobiDBLite consensus disorder prediction 1 49 - -
Pvu9g2088 703 Gene3D - 419 669 IPR023214 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2088 Pvu-Chr9 29956505 29961473 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2088 - - var:108332009 963.755
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2088 9 29956505 29961473 Pvu9g2088 9 29956505 29961473 ECH