Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2075 ATGCTGAAACATGAGACAGTGATGGAGCATGCAGGAGTTCATCATTATGAGCCTAATGCAGAAGCCAGAACAGATGTATTCCCTGCAGATGATAGCTATGGCATGTTCTTGTGGGTGGGAACACCAGTGCAAATTGTGTTGGTTATGATTGACACAGGGAGCCCCATCACATGGTTCCAGTGCGGCCCCTGCAGCCACTGCTACCCCATGCAGCGCCCTCCCTTCAACTCACATGCATCAACCTCCTTCAGAGAACTTGGCTGCTACTCGGACACGTGTCTCATCCCAATGATGAGGGGCATTTTGGGAAACTGCACCGGATGGAGTTGTAGATACAATGTAGAATATGACATGAAATCTCAATCTCGTTCCTTTGGTATCATGGTTACTGACACCCTTAACTTTGAGGACTCCAATGTTCAAGTCAAGGACTTCATACTGGGGTGTGGGAATTCTTATGAGGGACCCTTTAGGACTCAGTTTTCGGGAGTTTTAGGTCTCGGACGAGGTCCACTTTCAATGCAAAGTCAACTTCATGCAAAGGCCTTTTCCTTTTGCATAGTGAGTCTTGGATCGGAGAAACCTTCCTCTCTTGAGTTTTATGACACATTACCTAAACAACATGGTGACACTAAAGAATCCATTATGATTCCCTTTAGGGAGAACAGTAGATACCCTTTCTATTACTTTGTGCAGCTTGTGGGAATAGGCATTAACGGCTTCATGTTGGATATTCAATCTAGAGTTTGGGGTTATGGCTTGAACTACGATGGTGGGGTTGTTATAGACACGGGAAAACTGCTAACCTATTTGCCTAATGAAGCGTATAGTGTATTCAGGTCAGAGATACTTAGAACAGATGGAAACTTTACAAAGAATCAAGGAAATGAGGAGTTAGAGTTTTGTTACATGGAAGGTCCTACCAATGTGTATCCAACAGTTGAATTTTATTTTGAAAATGGTAACATTGCTGGTGAAAATTTCGTGTCCTTCAAATTGAACAACCATCAATTACTCATCACACCAGAACAGGGAATAGTTTGTCTATCGTTTGCTGAAGCAAAAAATTCTGCACTTACAGTTATTGGCACTAACAATCTCCAAGGAACTCTTTTAACGTATAATTTGGTTGATGAGATTATTATCTTCACATATAATAACTGTTAG 1167 0.4199 MLKHETVMEHAGVHHYEPNAEARTDVFPADDSYGMFLWVGTPVQIVLVMIDTGSPITWFQCGPCSHCYPMQRPPFNSHASTSFRELGCYSDTCLIPMMRGILGNCTGWSCRYNVEYDMKSQSRSFGIMVTDTLNFEDSNVQVKDFILGCGNSYEGPFRTQFSGVLGLGRGPLSMQSQLHAKAFSFCIVSLGSEKPSSLEFYDTLPKQHGDTKESIMIPFRENSRYPFYYFVQLVGIGINGFMLDIQSRVWGYGLNYDGGVVIDTGKLLTYLPNEAYSVFRSEILRTDGNFTKNQGNEELEFCYMEGPTNVYPTVEFYFENGNIAGENFVSFKLNNHQLLITPEQGIVCLSFAEAKNSALTVIGTNNLQGTLLTYNLVDEIIIFTYNNC* 389
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2075 388 SUPERFAMILY Acid proteases 30 388 IPR021109 -
Pvu9g2075 388 ProSiteProfiles Peptidase family A1 domain profile. 33 384 IPR033121 -
Pvu9g2075 388 Gene3D Acid Proteases 209 388 IPR021109 -
Pvu9g2075 388 Pfam Xylanase inhibitor N-terminal 33 198 IPR032861 -
Pvu9g2075 388 CDD pepsin_A_like_plant 33 388 IPR034161 -
Pvu9g2075 388 PANTHER OS07G0603500 PROTEIN-RELATED 30 377 - -
Pvu9g2075 388 PANTHER SH3 DOMAIN-CONTAINING PROTEIN 30 377 - -
Pvu9g2075 388 Pfam Xylanase inhibitor C-terminal 229 384 IPR032799 -
Pvu9g2075 388 Gene3D Acid Proteases 19 200 IPR021109 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2075 Pvu-Chr9 29792070 29793236 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2075 22 388 Miscellaneous Gene Families AT1G77480 23.990 8.56e-15 73.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2075 - K22683 vra:106753617 664.455