Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2071 ATGGTTGATCACTACAACAAGTTGGTTAAACTAGCTGCGAGGGCTTTTTACGATGATCTAACGAGTAAAGGAGAGAATCAACCCAAATCGGGAAGGAGTGATAACAGAGGAATCGCTGTAGTGATTCTTGATGCCCTCACAAGGCGACAATGGGTCAGAGAAGAGGATTTGGCAAAAGATCTCAAATTACACACAAAACAACTTCGCCGAACTCTGCGGTTTTTCGAAGAGGAGAAGATCATTACTCGAGAATATAGGAGAGAGACAGCAAAAGGAGCAAAATTGTATAGTGCTGCTACAGCTGCTACAGTTGATGTTCAACTGACTGGAAAAGAGGGAGAAGAGAAGGTCAAGTTGCACACACACTCTTACTGTTGTCTAGATTATGCACAGATATATGATGTGGTTAGGTACAGAATTCATCGCATGAAGAAGCTGCTGAAAGATGAATTGGACAACAAGAACACAATTGAAGAATATATCTGTACAAAGTGTGGAAAAAGATACAATGCTCTGGATGCATTGCGGTTAGTATCTTTTGAAGATGATGACTTCCATTGTGAAAGTTGTAATGGAAAACTTGAGGTAGAAAGTGACAAGTTTGTTGTTCAAGAAGGGCCCGACGGAGATGATAATGCAAGAAGACGACGTCATGAAAAGTTGAAAGACATGCTTCAAAAGATGGAGATACAACTCAAGCCTTTAATAGATCAACTCAGCAGGGTGAAAGATTTGCCTGTTCCAGAATTTGGCAGTCTCCTAGCATGGGAAGCTCGAGCTAGTGCTATGGGGCGTGCCAATGGAGATATGGCTGGTGATTCTAAAATTTCTCAGCTTGGATATAATGGAGCACCAATGCCTTATAGTGGGGATACCAAGGTTGTGGTGGATTTCAATGGGACTGAAGGCAACAGACATGATGTTAAGTCTGAAACTGAAACATCTCTAAAGGTTTTGCCACCATGGATGATAAAATCAGGGATGGTTCTTACAAAGGAACAACGAGGAGAGGTGAAGGAGGAAATAAAGATGGATGGGACTTCAACTTCCACATCAGCACAGTACTCGGATGACAAGAAATCAACAGTTGATCATGATGACAAAAAAAATATACAGGATGAGTATATCAAGGCTTATTATGCTGCTCTGCTTAAACAACAACATGAAATGGAAGCTTCTAAAAAACAAGATTTGACAGATACATTTACTGAAAATGATCCTTCAAGTCATGCTTCTAATCGTCAAGTTGGCATGAAATCAAAATACGAGGAAGATGATGATGGTACTGACTGGGAGCAAGCTCCAGTTGCAGGTACTGGAAATGAAAATTACAAGGTCAATGATTTGAATGTTCAAGCTGATGTTGCTCCAGCAGATGTCGATGAAGATGAAGATGTGGACTGGGAGGAAGGTTGA 1416 0.4089 MVDHYNKLVKLAARAFYDDLTSKGENQPKSGRSDNRGIAVVILDALTRRQWVREEDLAKDLKLHTKQLRRTLRFFEEEKIITREYRRETAKGAKLYSAATAATVDVQLTGKEGEEKVKLHTHSYCCLDYAQIYDVVRYRIHRMKKLLKDELDNKNTIEEYICTKCGKRYNALDALRLVSFEDDDFHCESCNGKLEVESDKFVVQEGPDGDDNARRRRHEKLKDMLQKMEIQLKPLIDQLSRVKDLPVPEFGSLLAWEARASAMGRANGDMAGDSKISQLGYNGAPMPYSGDTKVVVDFNGTEGNRHDVKSETETSLKVLPPWMIKSGMVLTKEQRGEVKEEIKMDGTSTSTSAQYSDDKKSTVDHDDKKNIQDEYIKAYYAALLKQQHEMEASKKQDLTDTFTENDPSSHASNRQVGMKSKYEEDDDGTDWEQAPVAGTGNENYKVNDLNVQADVAPADVDEDEDVDWEEG* 472
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2071 471 MobiDBLite consensus disorder prediction 457 471 - -
Pvu9g2071 471 PANTHER TRANSCRIPTION INITIATION FACTOR IIE, ALPHA SUBUNIT 8 449 IPR039997 -
Pvu9g2071 471 Coils Coil 58 78 - -
Pvu9g2071 471 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 145 205 IPR013083 -
Pvu9g2071 471 SMART tfiie3 37 208 IPR002853 GO:0006367
Pvu9g2071 471 ProSiteProfiles TFE/IIEalpha-type HTH domain profile. 5 137 IPR017919 -
Pvu9g2071 471 MobiDBLite consensus disorder prediction 391 471 - -
Pvu9g2071 471 Pfam TFIIE alpha subunit 39 153 IPR024550 -
Pvu9g2071 471 MobiDBLite consensus disorder prediction 402 416 - -
Pvu9g2071 471 MobiDBLite consensus disorder prediction 334 366 - -
Pvu9g2071 471 SUPERFAMILY Zinc beta-ribbon 150 197 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2071 Pvu-Chr9 29726533 29740386 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2071 K03136 - gmx:100779773 826.624