Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2068 ATGGTTCCAAATTGTGGTCATCTAGTGACCCTCCTTCTTGTCTTCTTAACGGTGGTTTTCACTGCCTCTGCTTGGGTTGGCGTCAACTGGGGAACCATGGCAACCCACCAACTTCCACCCGAGAAGGTGGTGAAGATGCTCAAGGAAAATGGGTTCACCAAATTGAAGCTCTTTGATGCGGATGAACTCATCATGGCAGCTCTTACGGGGACCGATATCCAAGTCATGCTTGCCATACCCAACAACATGCTGGAGAAGATAAGTAGCAGTCCTAAAGCTGCAGATTCTTGGGTCTATGATAATGTCATCACTTACTTGTTCACTGGTGGCGTAAAAATCAAGTACGTTGCTGTGGGTAATGAGCCTTTCCTTAAAGCATATAATGGTAGCTTTGCGAAGAAAACGCTGCCAGCCCTAAAGAATATACAGACATCACTTAATAAGGCCGGGTTGAGTTCCAAGGTCAAAATCACTGTTCCATTCAATGCTGATATTTACTATTCGCCTGATTCAAATCCATTGCCATCAGCTGGTGACTTCAGGCCTGAAATGAGAGACCTCACCATTGAGATAATCCAATTCTTGTATGCTAACAATGCACCTTTTACAGTTAATATCTACCCTTTCCTTAGTCTTTATGGCAACGAAGATTTCCCTTTTGATTTTGCATTTTTTGATGGAAAAAGCAAGCCTCTTAGGGACGGCAAGGCACTTTACACCAATGTGTTTGATGCAAATCTTGACACTCTTCTGTGGGCTTTAGACAAGGCAGGATATCCTGACATGAAGGTTATAATTGGGGAAATTGGGTGGCCAACAGATGGTGATAAGAATGCTAATGCCAAGAGTGCAAGGAGGTTCAACTTTGGTTTGCTTAAACATGCTCTGAGTGGCAAGGGTACCCCTAAAAGGAGAGGCACAATTGACTTGTTCTTATTCAGCCTCATGGATGAGAACATTAAAAGTGTTGCTCCTGGGAACTTTGAGAGGCATTGGGGGGTTTTTGAGTTTGATGGCAAGCCAAAGTATGAATTAGACTTAACAGGTGAGCACAAGGAAAAGGGCCTTGTCCCTGTGGAAGGTATAAAATACCTGCAAAAGAGATGGTGTATTTTGAATCCAGATGTTACTAACTTTGATGATTTGGCTGGTAGCAACTACTTGGCTGGTAGCATTGACTATGCTTGTACCTTTTCTGACTGCACTTCCCTTGGCTATGGCTCTAGTTGTAATTATCTTAGTGTCCAAGGGAATGCATCTTATGCCTTCAATATGTATTATCAAGTAAATAACCAACAAGATTGGAGCTGTGATTTCTCTAGTTTGGCTACCATAACACAGAAAGATCCATCAGAGAGAGGCTGCCAATTTCCCGTGATGATAGCTCGCAGTTCATCTTTGCTGCTACATCAAGGACTTCTAGGCATCCTGAAGAAAACACTGGAGGTTTATATTTTTGTCATCATTTTGTTATAG 1476 0.4255 MVPNCGHLVTLLLVFLTVVFTASAWVGVNWGTMATHQLPPEKVVKMLKENGFTKLKLFDADELIMAALTGTDIQVMLAIPNNMLEKISSSPKAADSWVYDNVITYLFTGGVKIKYVAVGNEPFLKAYNGSFAKKTLPALKNIQTSLNKAGLSSKVKITVPFNADIYYSPDSNPLPSAGDFRPEMRDLTIEIIQFLYANNAPFTVNIYPFLSLYGNEDFPFDFAFFDGKSKPLRDGKALYTNVFDANLDTLLWALDKAGYPDMKVIIGEIGWPTDGDKNANAKSARRFNFGLLKHALSGKGTPKRRGTIDLFLFSLMDENIKSVAPGNFERHWGVFEFDGKPKYELDLTGEHKEKGLVPVEGIKYLQKRWCILNPDVTNFDDLAGSNYLAGSIDYACTFSDCTSLGYGSSCNYLSVQGNASYAFNMYYQVNNQQDWSCDFSSLATITQKDPSERGCQFPVMIARSSSLLLHQGLLGILKKTLEVYIFVIILL* 492
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2068 491 Pfam Glycosyl hydrolases family 17 26 346 IPR000490 GO:0004553|GO:0005975
Pvu9g2068 491 SUPERFAMILY (Trans)glycosidases 26 346 IPR017853 -
Pvu9g2068 491 Gene3D - 364 465 - -
Pvu9g2068 491 SMART X8_cls 368 457 IPR012946 -
Pvu9g2068 491 Gene3D Glycosidases 25 355 - -
Pvu9g2068 491 PANTHER GLUCAN ENDO-1,3-BETA-GLUCOSIDASE BG1-RELATED-RELATED 7 469 IPR044965 GO:0004553|GO:0005975
Pvu9g2068 491 Pfam X8 domain 369 444 IPR012946 -
Pvu9g2068 491 ProSitePatterns Glycosyl hydrolases family 17 signature. 262 275 IPR000490 GO:0004553|GO:0005975
Pvu9g2068 491 PANTHER O-GLYCOSYL HYDROLASE FAMILY 17 PROTEIN 7 469 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2068 Pvu-Chr9 29686749 29688986 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2068 26 461 Miscellaneous Gene Families AT2G19440 57.798 0.0 527
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2068 - - gmx:100781894 854.744
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2068 9 29686749 29688986 Pvu9g2068 9 29686749 29688986 ECH