Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2066 ATGGTTGCAACAGCCGTAACGGCGTCGTTTATCCCTGTTGTGCCTTCGCCGGACTCTGGAAAAGGGAAGCAGACGCAATTGGGTGGTGGCTCTGCGAACCTGAGAGGACTCCAACCGAGAAATGGTTTATGCGGTGGCTTGCAGGTGAAGGCAAACGCGCATGCCCCTCCGAAGGTTAACGACACCGTGAAGGTTGAGGATGATTTGCCATCGTCGTCGTCACTTTCTCATGCTCCGAGGACTTTCATCAACCAGTTACCGGACTGGAGCATGCTTCTCGCCGCCATCACCACAGTCTTCCTAGCCGCGGAGAAGCAGTGGATGATGCTCGATTGGAAGCCGCGCCGCCCCGACATGCTCGTTGACCCCTTTGGGATTGGAAAGATCGTGGAGGACGGGCTTGTGTTCAGGCAGAACTTCTCAATTCGGTCCTACGAAATTGGCGCCGATAAAACCGCGTCTATAGAGACGTTGATGAATCATTTGCAGGAGACAGCACTTAATCATGTTAAGACTGCGGGGCTTCTTGGTGATGGCTTTGGCTCCACGCCTGAAATGTGTAAGAAGAACTTGATTTGGGTGGTTACCAAGATGCAGGTTGTGGTTGATCGGTATCCTAAATGGGGTGATGTTGTTCAAGTCGACACTTGGGTTTCCGCATCAGGGAAGAACGGTATGCGTCGTGACTGGCTTGTACGTGATGCCCAAACGGGTGAAGTCTTGACAAGAGCCTCCAGTGTTTGGGTCATGATGAATAAAGTGACAAGGAAACTGTCTAAGATTCCCGAAGAAGTCAGGGGAGAGATAGGCACTTATTTTGTGGATTCTGCTCCAGTTGTGGAAGAGGATAAAAGAAAACTATCCAAACTTGATGATTCAGCTAATTTCATTCGCACTGGTTTAAGTCCTAGATGGAGTGATCTAGATGTTAACCAGCATGTTAACAATGTGAAGTACATTGGGTGGATTCTGGAGAGTGCTCCACAGCCACTTTTGGAGAGTCATGAGTTGTGTGCCATGACTCTGGAGTACAGAAGGGAGTGTGGCAGGAAGAGTGTGCTGGATTCCCTGACTGATATATCTGGTGCTAATGTAGGCAGTTTAGCTGAAGGTGGACTTTTTGAGTGCAAACACTTGCTTCGACTTGAAGATGGTGCTGAAATTGTGAGGGGTAGGACTGAATGGAGGCCAAAATCTGCAAACAACTTTGTTAGTCAGGTTCCATCAGAAAGCACCTGA 1239 0.4915 MVATAVTASFIPVVPSPDSGKGKQTQLGGGSANLRGLQPRNGLCGGLQVKANAHAPPKVNDTVKVEDDLPSSSSLSHAPRTFINQLPDWSMLLAAITTVFLAAEKQWMMLDWKPRRPDMLVDPFGIGKIVEDGLVFRQNFSIRSYEIGADKTASIETLMNHLQETALNHVKTAGLLGDGFGSTPEMCKKNLIWVVTKMQVVVDRYPKWGDVVQVDTWVSASGKNGMRRDWLVRDAQTGEVLTRASSVWVMMNKVTRKLSKIPEEVRGEIGTYFVDSAPVVEEDKRKLSKLDDSANFIRTGLSPRWSDLDVNQHVNNVKYIGWILESAPQPLLESHELCAMTLEYRRECGRKSVLDSLTDISGANVGSLAEGGLFECKHLLRLEDGAEIVRGRTEWRPKSANNFVSQVPSEST* 413
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2066 412 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 294 396 IPR029069 -
Pvu9g2066 412 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 1 401 IPR045023 GO:0006633|GO:0016297
Pvu9g2066 412 Gene3D Hotdog Thioesterase 126 402 - -
Pvu9g2066 412 CDD 4HBT 136 252 - -
Pvu9g2066 412 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 130 282 IPR029069 -
Pvu9g2066 412 Pfam Acyl-ACP thioesterase 133 396 IPR002864 GO:0006633|GO:0016790
Pvu9g2066 412 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 1 401 - -
Pvu9g2066 412 Pfam Acyl-ATP thioesterase 1 122 IPR021113 GO:0016790
Pvu9g2066 412 MobiDBLite consensus disorder prediction 14 34 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2066 Pvu-Chr9 29658343 29662475 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2066 1 399 Acyl Lipid Metabolism Gene Families AT1G08510 71.220 0.0 577
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2066 K10781 - gmx:100781381 705.671
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2066 9 29658343 29662475 Pvu9g2066 9 29658343 29662475 ECH