LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu9g2064	ATGTACGGGCCTGACTCCGATAACATTGGCGTTAAGGTTTTGCGTAGCGTTGCGGGCAGAGTGGAAGTAGAACACACTTGGCGGATGGAGGAGAATTGGAGAGGTTGCAATTCAGGAATGGTGTTGGAAACCCTAACACAAAGAGGTTGGTGTTTGGAAGACACTGATCAATTGAAGGCCATCATCCACATTCAATCTGCACTCGCCGATGAACATTCTCAATTCCTACGTTGTGTCGAGTCAGAGCTTCTCAATTCGGACCTTCGATCTATTGGCGCCAAGTCCTTACCCCAACCCTCTCTTCTGCGCAATGCTTCGTCTCTTCACGGCCCAAAAGTTCTTCAGATAACTTCGGTGAGGGATATATCTCAGAGTAGCGTGGATGAGTTTTTGAGGAATTCAGGTAGTCGGAGAGTTCTCAGATTGGGTCTCACTGATGGTCACTCCGAAATAACTGCTGTGGAATATTCTCACGTTCCTTCTATACCTGACAATGTTGTTCCGGGTACTAAGATCCGTTTGGAAAATAAAGTTGTAGTTCGCAGTGGAATTGTTTGCTTAAATCCTAAAGTATTGACTGTATTAGGAGGTGTTGTTCAATCACTCTACGATGAATGGGAGATGAATAAAAAATATTCAGGATTCTCCCGATCATCTTTAAAAAAGCTAGAGAATCGTGATACAGGTGGTCCTCCACAGTTTGTGAAGCTGCAGGTTGGATCTTACTCAGGTATTACAGATTATAACTCTAGTAGAAGTCATAAGCCAATTGCTGATGTTGGTGAAGCTGAGAAGAGACAAACAGGTATTGCAGATTATAACTCTAGTAGAAATCGTAAACCAATTGCTATGCTTGGTACAACTGAGACGAGACCAACTGATATCCAGCAAGGCCCCAATCAGAAGGCAGATATTTTGGATGCAAATCAAGAATCCAATCTACCTCAACAAAGAGCTCAAGACAAGGCTAGTAGTTCAGGCACAAGGCCAAAAGAAGTTGTGGAATCTGTTCCTGTGCAAAATCAAGCAGCTGCCCAAAAATTACTTCAGAAGCTGAATCAACCAAGTCAGAATGATCGACGTGGTAGGGGTTGGAAACATAGGGGCAAGGGGAAAGAAGATGATCCAGTTGTATTCACTCTGGAAGAATATGAAAACAGAAAGGCGCAGACAAAGCTTACTAATATAGAAAAGGATCGATACATTAGTCATGATGAGGATTTTGCTAGGCACCTTCAAAATCAACTAAACCTTGAGGATTCTCGGGTAGGATTGGGTTTGGGTACTTATGAAGCCAAGGCACAGGATATTAGGATAAGTATGTTCACATATGAAAGGGATTCTGACAGCAGCCATCAAATGGCACAAGGAGGAAGAGGAAGGGGAAGGGGAAGAGGAAGGGGGAGAGGAAGGGGAAGAGGAAGGGGGAGATGA	1434	0.4379	MYGPDSDNIGVKVLRSVAGRVEVEHTWRMEENWRGCNSGMVLETLTQRGWCLEDTDQLKAIIHIQSALADEHSQFLRCVESELLNSDLRSIGAKSLPQPSLLRNASSLHGPKVLQITSVRDISQSSVDEFLRNSGSRRVLRLGLTDGHSEITAVEYSHVPSIPDNVVPGTKIRLENKVVVRSGIVCLNPKVLTVLGGVVQSLYDEWEMNKKYSGFSRSSLKKLENRDTGGPPQFVKLQVGSYSGITDYNSSRSHKPIADVGEAEKRQTGIADYNSSRNRKPIAMLGTTETRPTDIQQGPNQKADILDANQESNLPQQRAQDKASSSGTRPKEVVESVPVQNQAAAQKLLQKLNQPSQNDRRGRGWKHRGKGKEDDPVVFTLEEYENRKAQTKLTNIEKDRYISHDEDFARHLQNQLNLEDSRVGLGLGTYEAKAQDIRISMFTYERDSDSSHQMAQGGRGRGRGRGRGRGRGRGRGR*	478

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu9g2064	477	Pfam	RecQ mediated genome instability protein	70	208	IPR013894	-
	Pvu9g2064	477	MobiDBLite	consensus disorder prediction	462	477	-	-
	Pvu9g2064	477	Gene3D	-	87	215	IPR042470	-
	Pvu9g2064	477	MobiDBLite	consensus disorder prediction	444	477	-	-
	Pvu9g2064	477	PANTHER	SURVIVAL OF MOTOR NEURON-RELATED-SPLICING FACTOR 30-RELATED	41	452	-	-
	Pvu9g2064	477	PANTHER	RE01471P	41	452	-	-
	Pvu9g2064	477	MobiDBLite	consensus disorder prediction	246	299	-	-
	Pvu9g2064	477	MobiDBLite	consensus disorder prediction	353	373	-	-
	Pvu9g2064	477	MobiDBLite	consensus disorder prediction	311	331	-	-
	Pvu9g2064	477	SMART	DUF1767_2	42	131	IPR033472	-
	Pvu9g2064	477	MobiDBLite	consensus disorder prediction	311	335	-	-
	Pvu9g2064	477	MobiDBLite	consensus disorder prediction	269	299	-	-

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu9g2064	K18404		-	gmx:100782461	629.787

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu9g2064	9	29625091	29630087	Pvu9g2064	9	29625091	29630087	ECH