Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2058 ATGGACGATCACCTGAGTTCAACTCCCAAAAACGCCATTGGCCTCTGTCTCCTCCCACAGGAACTCATCCAAGACATCTTCCTCTCCCTCGTCCTACCCGAAATCGTTCGCTTAAAACTCGTCAACAAATCCTTCTCCCGAATCATCTCCGACCACACCTTCGTTCGCCAGTGCAACACGCTATCCACTTCCACCACCTGGCTCTTCGTCTACAAAAAGCGCTGGCTCCGGGACGCCGTGCTCCACGCCTTCACCGATCGGAGCTCCGATCGCTGGTTCCGGATCCCCATCGCGGACCTTCTCAAACCGGTTCACTTCCACGGAGAGGACCTCTACTTCCTCGCCGCCTCCAACAACGTCTTCCTATTTGCCTCCAACACCGTTCGCGAGGTCGTCGCTGTTAACTTAGTCTCCGTCACCGTTAAGAAGATCCCCCCCTCCCCGTTGGGTCCACGCGGCACCTCCTCGTGGAGACGATCCGGAATGAAGCTTGTCACCGAACCGTCCGGGTCGGGTCACTTTCGTTTCATGTTCGCGGAGTTCGTCGCGAACCACCCCGTTTTGTTTGTGTACGACTCCAGGACTGACACGTGGAAGTCAACGGAGGCAGTGGAGAGTGGCGCGAGTGAACTGTCGCCACGTGGCGGGGGTCACGTTTTTCTCAACGTGGTTCACGGGCCCAGAGAGAGCGTTCTGGTTGCGTCAACACCGGAGTGCGACGCGGCCGTGGTTCTGCGGCCGAGATTTAACTACGCGAGGGGTGTCGGCGGTAATTTGAGCGTCGGATTCAGCTGGGGGAACGTGATGGACCGGTTACACGTATACGGTGATGGGTATATGATGATTGTGAAATCAGAGGGTGATAGGGTAACCGGCGAGGGTGGGGTGAGGGTTTTGAAGGGTGTGGAACTGTGGGGTCTTAGCTTGGACGGAAGGAAGTGGGAGTTTGTGTCGACGGTTGGCGGTGTGGTTGAGAAGCCTTATGCGGCCATGATGGGATGCTTGGAGGAGAAAAACGGGATCGTGATGGCGGCTTTGGTCTCTAATTGCGACGGAGTTTGGGATATGATGTGGCTCTCTTTTGATACGAAATGGATGCAGTGGACATGGATGCCCCTTCCTGATTGCAAAATGAAGGGTTGGAACATGGCCGGAATAAGCTTCTCTTCTGGACTTACCTTGCCATGA 1188 0.5572 MDDHLSSTPKNAIGLCLLPQELIQDIFLSLVLPEIVRLKLVNKSFSRIISDHTFVRQCNTLSTSTTWLFVYKKRWLRDAVLHAFTDRSSDRWFRIPIADLLKPVHFHGEDLYFLAASNNVFLFASNTVREVVAVNLVSVTVKKIPPSPLGPRGTSSWRRSGMKLVTEPSGSGHFRFMFAEFVANHPVLFVYDSRTDTWKSTEAVESGASELSPRGGGHVFLNVVHGPRESVLVASTPECDAAVVLRPRFNYARGVGGNLSVGFSWGNVMDRLHVYGDGYMMIVKSEGDRVTGEGGVRVLKGVELWGLSLDGRKWEFVSTVGGVVEKPYAAMMGCLEEKNGIVMAALVSNCDGVWDMMWLSFDTKWMQWTWMPLPDCKMKGWNMAGISFSSGLTLP* 396
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2058 395 SUPERFAMILY Galactose oxidase, central domain 86 385 IPR011043 -
Pvu9g2058 395 SMART fbox_2 18 58 IPR001810 GO:0005515
Pvu9g2058 395 Pfam F-box domain 17 54 IPR001810 GO:0005515
Pvu9g2058 395 SUPERFAMILY F-box domain 15 71 IPR036047 GO:0005515
Pvu9g2058 395 ProSiteProfiles F-box domain profile. 12 58 IPR001810 GO:0005515
Pvu9g2058 395 PANTHER GRAS FAMILY TRANSCRIPTION FACTOR FAMILY PROTEIN 2 394 - -
Pvu9g2058 395 PANTHER F-BOX/KELCH-REPEAT PROTEIN 2 394 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2058 - - gmx:100805433 678.322