Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2039 ATGGGTTGGGTCGCAGACACTCTTCACTCTGTTACTTCCATTCAGCTCAGAGAACTCTTCAACCACTTCATCAGTCTCGGTTTGATTGTAACATCGGCGCTCGTAATATGGAAAGTGTTAATCTGTGTTAGCGGCTGCCAATCACCCGTCGTCGTCGTTATTTCCGCAAGTATGGAACCTGGTTTCGGACGAGGTGACATTCTGTTTTTGCACACGAGCAAGGATCCCATTCGTGCAGGAGACATTGTGGTTTACAATATAGATGGAAAAGACATTCCAATTGTTCACCGTGTAATTGAGGTTCGTGAACGTCAAAATACTGAAGAAGCTTATATCCTCACAAAAGGAGACAACAATCCTTCAGATGACAGGGTTATGTATAATCCAGGCCAGAAGTGGTTGCAAGAACACCATATTATGGGAAGAGCTGTAGGGTTCTTGCCTTATGTTGGTTGGGTTACAATAATAATGACTGATATTCCTGTACTAAAGTATATACTGATTGGGGCATTGGGACTGCTAGTTTTAACAATGAAGGAATAA 543 0.4254 MGWVADTLHSVTSIQLRELFNHFISLGLIVTSALVIWKVLICVSGCQSPVVVVISASMEPGFGRGDILFLHTSKDPIRAGDIVVYNIDGKDIPIVHRVIEVRERQNTEEAYILTKGDNNPSDDRVMYNPGQKWLQEHHIMGRAVGFLPYVGWVTIIMTDIPVLKYILIGALGLLVLTMKE* 181
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2039 180 SUPERFAMILY LexA/Signal peptidase 50 148 IPR036286 -
Pvu9g2039 180 TIGRFAM sigpep_I_arch: signal peptidase I 22 167 IPR001733 GO:0006465|GO:0008233|GO:0016020
Pvu9g2039 180 PANTHER SIGNAL PEPTIDASE COMPLEX CATALYTIC SUBUNIT SEC11 1 179 IPR001733 GO:0006465|GO:0008233|GO:0016020
Pvu9g2039 180 CDD S26_SPase_I 49 143 IPR019533 GO:0004252|GO:0006465
Pvu9g2039 180 PRINTS Eukaryotic signal peptidase (S26B) family signature 53 68 IPR001733 GO:0006465|GO:0008233|GO:0016020
Pvu9g2039 180 PRINTS Eukaryotic signal peptidase (S26B) family signature 112 123 IPR001733 GO:0006465|GO:0008233|GO:0016020
Pvu9g2039 180 Gene3D Umud Fragment, subunit A 48 155 - -
Pvu9g2039 180 PANTHER SIGNAL PEPTIDASE I 1 179 - -
Pvu9g2039 180 Pfam Peptidase S24-like 45 144 IPR015927 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2039 Pvu-Chr9 29217404 29220613 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2039 K13280 - ath:AT1G52600 278.485