Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2034 ATGAAATTCGGAAAGAGTCTCAGCAACCAGATCGAGAAAACACTGCCTCAATGGCGCGACAAGTTTCTCTCCTACAAGGAACTCAAGAAGAAGCTCAAACTCGTCGAAGCCGCCCCCAAATCCTCCGAGGAACGCCTCGCCAAACGCCCTAGGCTCCATGCGGAAATGTCCATCGAGGAAACCGACTTCAGGAACTCGCTCGAACAAGAACTCCACAAATTCAACACCTTCTTCGAGGAGAAAGAGGAAGAGTGCATCATCAAATTGAAGGAGCTACAAGATAGGGTGGTCAAAGTAAAAGATTCTAATGAGCAGTTAATGGAAATTCGGAAGGAAATTGTGGATTTCCATGGAGAGATGGTCCTGCTCGAAAACTACAGTGCTCTTAACTACACAGGACTAGTGAAAATACTAAAGAAGTATGACAAGAGAACTGGTGCCCTCATTCGCTTGCCTTTCATTCAGAAGGTCTTGCAACAGCCTTTCTTCACCACTGACCTGCTCTACAAACTTGTGAAGGAGTGTGAAACAATGCTGGATCACCTTTTTCCGGTGAATGATCCCTCGATTTCCGGGGAGGCAACTCCCCAAGCTGAGGGGTGTGATGCTTCAACTTCAACCAGCAAAACGAATGATGATCTTCTGATGCCTAAGGAGTTTGCAGCAGCCAACCAGCACATTGATGAGAGCCTCTATATGAAGAGTACCATTACAGCTTTACATGTTTTGCAGGAAATTAGAAAGGGAAGCTCAACAGTAAGCATGTTTTCATTGCCACCGCTGCAGATGAGTGGTTTGGAAGAAACATGGAACAAAATCCCTATTCTGGAACAGACAGCCAAGTAA 846 0.4574 MKFGKSLSNQIEKTLPQWRDKFLSYKELKKKLKLVEAAPKSSEERLAKRPRLHAEMSIEETDFRNSLEQELHKFNTFFEEKEEECIIKLKELQDRVVKVKDSNEQLMEIRKEIVDFHGEMVLLENYSALNYTGLVKILKKYDKRTGALIRLPFIQKVLQQPFFTTDLLYKLVKECETMLDHLFPVNDPSISGEATPQAEGCDASTSTSKTNDDLLMPKEFAAANQHIDESLYMKSTITALHVLQEIRKGSSTVSMFSLPPLQMSGLEETWNKIPILEQTAK* 282
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2034 281 Coils Coil 89 109 - -
Pvu9g2034 281 ProSiteProfiles SPX domain profile. 1 155 IPR004331 -
Pvu9g2034 281 Coils Coil 64 84 - -
Pvu9g2034 281 Pfam SPX domain 108 157 IPR004331 -
Pvu9g2034 281 Pfam SPX domain 1 40 IPR004331 -
Pvu9g2034 281 PANTHER SPX DOMAIN-CONTAINING PROTEIN 3 1 281 IPR031142 GO:0016036
Pvu9g2034 281 CDD SPX_AtSPX1_like 2 144 - -
Pvu9g2034 281 PANTHER SPX DOMAIN-CONTAINING PROTEIN 2 1 281 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2034 Pvu-Chr9 29166213 29169188 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2034 - - gmx:100790400 431.795
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2034 9 29166213 29169188 Pvu9g2034 9 29166213 29169188 ECH
Pvu3g1708 3 37325367 37328043 Pvu9g2034 9 29166213 29169188 PCT