Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2030 ATGAAAATGTCGTTAGATGAAAAGACAAATGCACAAGCAGCAGCTGAAGCTGCTCATGAAGATTTTCAACCACCCTCTGATTGGGATCGTCAGCAACATAGTGACACGCTCATTCTCATGCTTCCAGGGTTTAGAAAAGAGCAATTGAAGGTTCAAGTGTCCAATAACCGTGTCCTAAGGTTGAGTGGTGAAAGAAAGATCAGTGAGAACAAATGGCGTCGATTTCGCAAGGAAGAACCCCTTTCTGATTCTCATGACACAAGTGGAATCAACGCCAAGTTTGAAGCTGGAATGCTATATGTAAAGCTTCCCAAAGTCATCAAACCACAACCACCACCACCACCACTTTCACCAACACAACAAGAACCTTCAAAGCCTCACCAACCAACAACTACAATAACTGATGATAAAAAACAAGATGCTCCTCAACAACATGATGATGAAAAAGACCCAAAAGAGGACAAAACTCAAGAGTCCAAGATAGAGGAACAACCACCACCTCCTCAAGAACCTAAGGAAGAGAATGAAGACTCTCGAGAGATGCCACAAAAGGAGATGAGCAAAGTAGAAACTGAAGAGAAAAGGAGAACTTCTGAAGCTCATGAACTGCATGAAACCACACAAACAGCAGTCAAGGAGAGAAAGGAAGGTCATGAAGATTCTGAAAAGAAGGTGGCAGAATCAGGAGTAAGAACAGATAATGAGAAAAAGATGGGGGAAGTTATAGGTTCTAATAAGAGTCAAGGAAGTGGTTCTGAAGGGTTAAGTAAGACTAGTGTAGCCAAGATGAACAGAAGCCTAGACATGATTTCTGACATGGTTTTGGAGGTTAAGAAGCAGAATAAAGTGGCCAACTTAGTTGTCCTTGTCTTTCTTGTGTTGCTCATTGGACTCTACCTAAAGAGTGTGGTCAAGTCATCTTTTGGAGGACCCAAAAACCAAGAGCTTTAA 951 0.4185 MKMSLDEKTNAQAAAEAAHEDFQPPSDWDRQQHSDTLILMLPGFRKEQLKVQVSNNRVLRLSGERKISENKWRRFRKEEPLSDSHDTSGINAKFEAGMLYVKLPKVIKPQPPPPPLSPTQQEPSKPHQPTTTITDDKKQDAPQQHDDEKDPKEDKTQESKIEEQPPPPQEPKEENEDSREMPQKEMSKVETEEKRRTSEAHELHETTQTAVKERKEGHEDSEKKVAESGVRTDNEKKMGEVIGSNKSQGSGSEGLSKTSVAKMNRSLDMISDMVLEVKKQNKVANLVVLVFLVLLIGLYLKSVVKSSFGGPKNQEL* 317
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2030 316 SUPERFAMILY HSP20-like chaperones 20 108 IPR008978 -
Pvu9g2030 316 MobiDBLite consensus disorder prediction 105 258 - -
Pvu9g2030 316 MobiDBLite consensus disorder prediction 241 258 - -
Pvu9g2030 316 PANTHER HEAT SHOCK PROTEIN 26 6 305 IPR045045 -
Pvu9g2030 316 MobiDBLite consensus disorder prediction 131 240 - -
Pvu9g2030 316 MobiDBLite consensus disorder prediction 106 122 - -
Pvu9g2030 316 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 17 122 IPR002068 -
Pvu9g2030 316 Pfam Hsp20/alpha crystallin family 36 110 IPR002068 -
Pvu9g2030 316 MobiDBLite consensus disorder prediction 1 34 - -
Pvu9g2030 316 PANTHER HEAT-SHOCK PROTEIN, PUTATIVE-RELATED 6 305 - -
Pvu9g2030 316 CDD ACD_sHsps-like 41 105 - -
Pvu9g2030 316 Gene3D - 2 108 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2030 Pvu-Chr9 29111608 29112875 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2030 - - vun:114164356 418.313