Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2029 ATGTTCGTACTCAGGGTCTTGTCCCGTTCCTCTGCAACCCTTTGTCGAAGCTTCACCTTCTCTGTTTCACGAAATTCCCAACCCTTTTCCAATCATTTTCATTCTCTCCTCCACCCATCACCCAACAAGCTGATTCCAGTTCAAGCTACTTTGCGGAATCCACTGAATTCATCCTTGGCTTCGAGATTCGGACTTTCTTCTTCGGCCTCATCTGAACCTGCTAGTAATGACGTAAAGGCATGTGAAGAAGAAAAGGTGACTGATCAGTCTGAACAAGCCAAAGCTGCCGATCAAACCGAAGAATCAGATGTAGAGAGTGAATGTGATCAATCCAGGGATGATTTAATAAAGCTTGTTGCTGAGAAGGAACTTCTCTTGAAGTTGAAACACAAGGAGATTGCGGAAATGCAGGACAAAGTTCTGCGAACTTATGCGGAGATGGAGAATGTCATGGGCAGAACAAGGCGTGAAGCGGAAAATTCGAAAAAATTTGCTATACAGAATTTTGCGAAGAGTCTACTAGATGTTGCTGATAATTTGGGAAGAGCTTCCTCTGTTGTAAAGGAAAGCTTTTCTAAAATTGAATCTCCTAAGCAGTCTTCTGAAGCAGCACAACTCCTGAAAACACTTTTAGAAGGTGTTGAAATGACAGAGAAACAACTTGCAGAGGTACTAAAAAAGTCCGGTGTAGAAAAATATGATCCTACAAATGAGCCATTTGATCCACACAGGCACAATGCCATCTTCCAAATCCCTGATGCTACCAAGCCCCCTGGCACTGTTGGAGTTGTTCTGAAGGCTGGATATATGCTCTATGATCGTGTTCTTCGTCCGGCAGAAGTTGGTGTAACTCAAGAAGTAGATGATAACGAAGCAACTAAATGA 885 0.4294 MFVLRVLSRSSATLCRSFTFSVSRNSQPFSNHFHSLLHPSPNKLIPVQATLRNPLNSSLASRFGLSSSASSEPASNDVKACEEEKVTDQSEQAKAADQTEESDVESECDQSRDDLIKLVAEKELLLKLKHKEIAEMQDKVLRTYAEMENVMGRTRREAENSKKFAIQNFAKSLLDVADNLGRASSVVKESFSKIESPKQSSEAAQLLKTLLEGVEMTEKQLAEVLKKSGVEKYDPTNEPFDPHRHNAIFQIPDATKPPGTVGVVLKAGYMLYDRVLRPAEVGVTQEVDDNEATK* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2029 294 MobiDBLite consensus disorder prediction 77 101 - -
Pvu9g2029 294 PANTHER GRPE PROTEIN HOMOLOG 26 288 - -
Pvu9g2029 294 SUPERFAMILY Coiled-coil domain of nucleotide exchange factor GrpE 127 229 IPR013805 -
Pvu9g2029 294 CDD GrpE 134 283 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu9g2029 294 Hamap Protein GrpE [grpE]. 76 285 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu9g2029 294 Pfam GrpE 92 284 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu9g2029 294 PRINTS GrpE protein signature 141 157 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu9g2029 294 PRINTS GrpE protein signature 237 252 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu9g2029 294 PRINTS GrpE protein signature 264 283 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu9g2029 294 ProSitePatterns grpE protein signature. 240 283 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu9g2029 294 PANTHER GRPE PROTEIN 26 288 IPR000740 GO:0000774|GO:0006457|GO:0042803|GO:0051087
Pvu9g2029 294 Gene3D - 121 227 IPR013805 -
Pvu9g2029 294 MobiDBLite consensus disorder prediction 65 108 - -
Pvu9g2029 294 Gene3D Head domain of nucleotide exchange factor GrpE 229 284 IPR009012 GO:0006457
Pvu9g2029 294 SUPERFAMILY Head domain of nucleotide exchange factor GrpE 230 285 IPR009012 GO:0006457
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2029 Pvu-Chr9 29103454 29107074 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2029 K03687 - gmx:100812682 434.876