Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2005 ATGGCGAAGAAAGAGATGGATGTTGTGAAGGGTTTGGACTTGCAAAGGTACATGGGTCGATGGTACGAGATTGCTTCATTCCCTTCGTTTTTTCAGCCAAGGAATGGTGAGAACACCAGAGCCACATATACCCTTAACAGCAGTGAGGGCACTGTTCATGTGCTGAACGAGACATGGAGTGATGGAAAGAGAAGCTTCATAGAGGGTAGTGCTTTCAAGGCTGACCCTAAAAGTGATGAAGCCAAGTTGAAGGTGAAGTTTTATGTTCCACCCTTCTTGCCCATCATCCCTGTCACTGGCAACTACTGGGTCCTCTTTGTTGATGATGATTATCAGTATGCTTTGGTTGGCGAACCAACCAGGAAAAACCTTTGGATTCTAAGCAGGAATACCCAAATAGATGAGGAGATCTACAAGCAGCTTGTTGAGAGAGCCAAGGAGGAAGGTTATGATGTGAGCAAACTGCACAAGACTCCACAGAGTGATCCTCCTCCACTAGGGGAAGAAGGACCCAAAGACACCAAAGGCATTTGGTGGATCAAATCCATTTTTGGGAAATAG 561 0.4581 MAKKEMDVVKGLDLQRYMGRWYEIASFPSFFQPRNGENTRATYTLNSSEGTVHVLNETWSDGKRSFIEGSAFKADPKSDEAKLKVKFYVPPFLPIIPVTGNYWVLFVDDDYQYALVGEPTRKNLWILSRNTQIDEEIYKQLVERAKEEGYDVSKLHKTPQSDPPPLGEEGPKDTKGIWWIKSIFGK* 187
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2005 186 SUPERFAMILY Lipocalins 5 164 IPR012674 -
Pvu9g2005 186 MobiDBLite consensus disorder prediction 152 174 - -
Pvu9g2005 186 ProSitePatterns Lipocalin signature. 11 24 IPR022272 -
Pvu9g2005 186 PANTHER TEMPERATURE-INDUCED LIPOCALIN-1-LIKE 1 186 - -
Pvu9g2005 186 PIRSF Lipocalin_ApoD 1 171 IPR022271 -
Pvu9g2005 186 CDD lipocalin_Blc-like 9 158 - -
Pvu9g2005 186 PANTHER APOLIPOPROTEIN D 1 186 - -
Pvu9g2005 186 Gene3D - 1 163 IPR012674 -
Pvu9g2005 186 PRINTS Bacterial lipocalin signature 12 26 IPR002446 -
Pvu9g2005 186 PRINTS Bacterial lipocalin signature 50 59 IPR002446 -
Pvu9g2005 186 PRINTS Bacterial lipocalin signature 122 133 IPR002446 -
Pvu9g2005 186 PRINTS Bacterial lipocalin signature 149 159 IPR002446 -
Pvu9g2005 186 Pfam Lipocalin-like domain 12 160 IPR000566 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g2005 Pvu-Chr9 28760668 28762578 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2005 K03098 - cpap:110816011 328.176