Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g2001 ATGGGTTGTTTCATGAGCAAAAACGCTGATACCAAAGCCAGCAGGATCGCACGTTGGCGAGCCACTGGAATTGTTGCTTTGCGCGATTCCAAATTAAAGACATTTCCAGATGAAATTATTACGTTAGACACTTCTGTTCGCACTCTTGACTTGACGCATAATCGAATAGATAAGTGGTTTTTCATTCTTTTCTTATTTTTAGCTTACATTTTGGTTAAGATGTCATTGATCCAAAGAGGATATGTTGACATTCCAGTGGAAATCAACAAGTTAATTAATGTACAACGCTTGATATTAGCGGAGAACTTCATCGAGAGACTACCAGTGAGTTTAGGCAAACTCCAATCTTTGAAACTGATGAACCTGGACGGAAATCGAATTACTTCCTTACCTGATGAATTGGATCAGTTAGTAAGGCTTGAACGCTTATCTGTCTCAAGGAATTTATTAGCATCCTTGCCAGTAACTATTGGAAGTTTGAGAAATTTGGTGCTTTTGAATGTCTCAAATAACAAGTTACAGTCTCTTCCAGAATCTGTTGGTAGTTGCTCCTCTTTGGAAGAGTTACAAGCTAATGATAATCTTATTGAAGATCTTCCATCTTCAGTGTGCAATCTCTCTCACTTGAAGTCACTTTGCTTGGATAACAATAATGTGAAGCAGACACCTCTGAATTTATTGAAAGACTGCAAAGCTCTTCAGAACATATCACTGCATGGTAATCCTATATCAATGGATCAATTGCAACAGATGGAAGGGTTTCAAGAGTTTGAAGCAAGGAGGAAAAAGAAGTTTGACAAACAAATTGATTCAAATGTGATGATCGGTTCCAAAGGTCTTGATGAGGGTGTTGATTTATGA 861 0.3775 MGCFMSKNADTKASRIARWRATGIVALRDSKLKTFPDEIITLDTSVRTLDLTHNRIDKWFFILFLFLAYILVKMSLIQRGYVDIPVEINKLINVQRLILAENFIERLPVSLGKLQSLKLMNLDGNRITSLPDELDQLVRLERLSVSRNLLASLPVTIGSLRNLVLLNVSNNKLQSLPESVGSCSSLEELQANDNLIEDLPSSVCNLSHLKSLCLDNNNVKQTPLNLLKDCKALQNISLHGNPISMDQLQQMEGFQEFEARRKKKFDKQIDSNVMIGSKGLDEGVDL* 287
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g2001 286 PANTHER LEUCINE-RICH REPEAT-CONTAINING 74 278 - -
Pvu9g2001 286 PANTHER LEUCINE-RICH REPEAT-CONTAINING 7 56 - -
Pvu9g2001 286 Pfam Leucine rich repeat 93 150 IPR001611 GO:0005515
Pvu9g2001 286 ProSiteProfiles Leucine-rich repeat profile. 162 183 IPR001611 GO:0005515
Pvu9g2001 286 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 7 7 56 - -
Pvu9g2001 286 PANTHER PLANT INTRACELLULAR RAS-GROUP-RELATED LRR PROTEIN 7 74 278 - -
Pvu9g2001 286 SMART LRR_bac_2 137 156 - -
Pvu9g2001 286 SMART LRR_bac_2 183 202 - -
Pvu9g2001 286 SMART LRR_bac_2 160 179 - -
Pvu9g2001 286 SMART LRR_bac_2 114 133 - -
Pvu9g2001 286 Gene3D Ribonuclease Inhibitor 10 273 IPR032675 -
Pvu9g2001 286 SUPERFAMILY L domain-like 26 246 - -
Pvu9g2001 286 SMART LRR_typ_2 91 113 IPR003591 -
Pvu9g2001 286 SMART LRR_typ_2 137 159 IPR003591 -
Pvu9g2001 286 SMART LRR_typ_2 114 136 IPR003591 -
Pvu9g2001 286 SMART LRR_typ_2 206 229 IPR003591 -
Pvu9g2001 286 SMART LRR_typ_2 160 183 IPR003591 -
Pvu9g2001 286 ProSiteProfiles Leucine-rich repeat profile. 116 137 IPR001611 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g2001 44 258 Receptor kinase-like Gene Family AT3G47570 30.222 2.08e-14 71.6
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g2001 - - var:108332192 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g2001 9 28696796 28706775 Pvu9g2001 9 28696796 28706775 ECH