Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1987 ATGGATGCGAATGTACTCGAAGCGAAAGCAGAAGCAATTCGCGGCTATGAACTTCGTCTCATTCGGTGTACTCTCAGTCATGATCAACCGCAACAACTTTGCGCCTCGCAGAAACGTGATTCCTTGGATGCTTCCATCAACCACCTCTTGAATTTGATTCAGTGTGGCAATTATATCCAAGCGCTCACCTCCCAACCATCCTTCCACCTTGTCTTCCGACTCGCCGATCATGACTCACCGCCACTCAACGATCCCGGTCGTCTCTATGCTCTGTTGGTTGATCGCGCCGAGTGCTTCATCGCCGCCGCTGCCAGCGATGTCGTTGAACAGCGTCGTAGGGGCATGCTCGTCACGTGCATCGCTATCGCCGCGTTTCTAGGGTTTACTCAATCCAACTTCACCGGGCCCTTGAACGGGGCAGAGCTACCGAGGTGTCCTCTGTGTTTGGATGGTGGTGATGAAGAGCGGGACAATTGGGCGCGGAATCAGCTTATGTCTGCTGGTTCTGAATTGCTCGGAAAGTTCTCAAATCTTCAGTATATAGTTTTTGCGAAGATGTTGCTTATGCGGGTAAAGGATTTAGGCGTTGAGATGAAAAGCCTTTCGTGGTGGCTTGCGAGGGTTTTGCTTGTTCAACAGAGGGTTTTGGATGACAGGTCTTCTTCCTTGTCTGATCTCTTGCATGTGTATATGGGTGAAGCTTTGCAGATGTTTGGCTCTCGCGAACAAGTTGAGAGTTACTGGCAAGATGATTTACACGATGGAGAGAGCTCGGTGATTCTCTCTGTGCTTCATTTAGAGGCTGGCATTATTGAATATGTATATGGACGAGTTGACTCTTCCAGGATGCATTTTAAATCAGCTGAGATGGCAGCTGGGCTTAAGCTTTCAGTCACTGGGGTACTTGGTTTCCGTACGGAACACCAGGCAGAACCAAAGGCACAGCTGGTACTTGTTACCAACACAGGTCCATCAAATAATGTGGATGAAAACTGTCCCTTAACGGGTACCGCTACCCAAACATGTGATTCCAACAATGGTGAAGATAATTGGAATTTGAATCAGCATGAAACCTCTGAAGCATCTGATGTACTCAGAATACCGAAGTTGTTAGAAAAAGATGATGACTCTAGAACTAGGTCTCTACCACCTCAAGGCATAGAAAATGGTGGCCATGTTACTCCCAGTTTGACAGCATCACAGCAAGCTGTAATTCTGGCATTTTGCCTTTTGATTGAGAAGAGCTCCCGACACGATGAGTTGCAGCGATGGGATATGGCACCTTATATTGAAGCAATTGATTCTCAGAACTTCTTCTACTTTACTACAAGGTGTTTATCGGATATTTTACGTATTCGATGGGAGTCGTCTCGTAGCCGAACCAAGGAGCGTGCCTTACTCATGATGGATAACTTGGTTAAACATATTTATAAGCCTTCTCCAGCCATAGCAGATAGAATCGCTTTTAGTTATGCTGTTTATATGCCTAGTATTCCCGCATTAAGGAAGGAATATGGGTTACTTTTGGTGCAATGCGGTTTGATAGGGGATGCAATGAAGGAGTTTGAAGAATTAGAATTATGGTATTATCTTATATACTGCTACAGTTTGTTGGGGAAGAAAGCAACCGCTGTTGAACTCATCAGGAAGCGTCTTTTGGAAACACCAAATGACCCCAGATTATGGTGTTCCCTGGGTGACATTACAGATGATGATGCATGCTTTGAAAAAGCTCTGGAAGTTTCAAACAATAGGTCTTACAGAGCAAAGCGTTCTCTGGCTCAAAGTGCCTACAAAAGAGGAGACTATAAGACATCTCAAATTTTGTGGGAGTCTGCATTGGCAATGAACTCTATGTACCCAGATGGTTGGTTTCAACTTGGTGATGCTGCATTGAAGGCTCAAGATACAGAAAAGGCTCTGGATGCGTTTACTCGTGTAATTCAACTTGATCCTGAAAATGGGGATGCTTGGAATTACATTGGATCCTTGCATATGATGAAAAAGAAGGGCAAGGAGGCCTTTATCGCATTTAAAGAAGCCTTGAAATTCAAACGGACCAGCTGGCAATTATGGGAGAAATATAGCTATGTTGCTGTTGAAATTAGCAATATCAGTCAGGCTCTGGAAGGTGTACAGATGGTTTTGGACATCACCAATAATAAGAGAGTAGATAGTGAATTATTGGAAAGAATCACAGAGCAGGTGGAAAAGAGGCTTTTATCATGTAATATGCCTCCTTTGATATCCGATAATATGCCAAAAACAGATGAGTTATGCATTGTCGATACTGGAGCAGAATATGAAATGGAAGTTCGTGGAGCATCTGTTGCAGGAAGATCACGTGAAGCTGAGCAATTATTGTTTTTACTTGGAAAAGTTTTACAACAGATAGTTAAAAACGGGAGTGGATTTGGATCTGAAATCTGGGGCTTATATGCCAAATGGCACAGAATTAATGGAGATCTCATGATGTGTTCTGAAGCCCTCTTAAAGCAAGTTAGGTCACTCCAGGGATGTGATACGTGGAAGGACCAAGATCGGTTCAAAAAATTTGCAAAATCGTCTTTGGATCTTTGCCATGTATACGTGGACATGTTTTCATCTGCTTCTGGTAGTAGTAAACAATTGTCTGCAGCTGAGCTGCACTTGAAGAATGCTCAGAGCTGCTTCTCCGATACACAAGAGTTCAGGGATCTTCAAGCTTGCTATGATGAAGTCAAAATTAAACTCCAATCCAACTCCATCAATGCCTAG 2757 0.4385 MDANVLEAKAEAIRGYELRLIRCTLSHDQPQQLCASQKRDSLDASINHLLNLIQCGNYIQALTSQPSFHLVFRLADHDSPPLNDPGRLYALLVDRAECFIAAAASDVVEQRRRGMLVTCIAIAAFLGFTQSNFTGPLNGAELPRCPLCLDGGDEERDNWARNQLMSAGSELLGKFSNLQYIVFAKMLLMRVKDLGVEMKSLSWWLARVLLVQQRVLDDRSSSLSDLLHVYMGEALQMFGSREQVESYWQDDLHDGESSVILSVLHLEAGIIEYVYGRVDSSRMHFKSAEMAAGLKLSVTGVLGFRTEHQAEPKAQLVLVTNTGPSNNVDENCPLTGTATQTCDSNNGEDNWNLNQHETSEASDVLRIPKLLEKDDDSRTRSLPPQGIENGGHVTPSLTASQQAVILAFCLLIEKSSRHDELQRWDMAPYIEAIDSQNFFYFTTRCLSDILRIRWESSRSRTKERALLMMDNLVKHIYKPSPAIADRIAFSYAVYMPSIPALRKEYGLLLVQCGLIGDAMKEFEELELWYYLIYCYSLLGKKATAVELIRKRLLETPNDPRLWCSLGDITDDDACFEKALEVSNNRSYRAKRSLAQSAYKRGDYKTSQILWESALAMNSMYPDGWFQLGDAALKAQDTEKALDAFTRVIQLDPENGDAWNYIGSLHMMKKKGKEAFIAFKEALKFKRTSWQLWEKYSYVAVEISNISQALEGVQMVLDITNNKRVDSELLERITEQVEKRLLSCNMPPLISDNMPKTDELCIVDTGAEYEMEVRGASVAGRSREAEQLLFLLGKVLQQIVKNGSGFGSEIWGLYAKWHRINGDLMMCSEALLKQVRSLQGCDTWKDQDRFKKFAKSSLDLCHVYVDMFSSASGSSKQLSAAELHLKNAQSCFSDTQEFRDLQACYDEVKIKLQSNSINA* 919
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1987 918 Gene3D Tetratricopeptide repeat domain 464 738 IPR011990 GO:0005515
Pvu9g1987 918 PANTHER UNCHARACTERIZED 25 908 IPR044244 -
Pvu9g1987 918 ProSiteProfiles TPR repeat profile. 621 654 IPR019734 GO:0005515
Pvu9g1987 918 SMART tpr_5 621 654 IPR019734 GO:0005515
Pvu9g1987 918 SMART tpr_5 525 558 IPR019734 GO:0005515
Pvu9g1987 918 SMART tpr_5 655 688 IPR019734 GO:0005515
Pvu9g1987 918 SMART tpr_5 587 620 IPR019734 GO:0005515
Pvu9g1987 918 Pfam Tetratricopeptide repeat 626 683 - -
Pvu9g1987 918 ProSiteProfiles TPR repeat region circular profile. 621 654 - -
Pvu9g1987 918 SUPERFAMILY TPR-like 504 617 IPR011990 GO:0005515
Pvu9g1987 918 MobiDBLite consensus disorder prediction 373 394 - -
Pvu9g1987 918 SUPERFAMILY TPR-like 585 710 IPR011990 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1987 Pvu-Chr9 28460380 28469219 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1987 K24935 - gmx:100803449 1354.73