Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1984 GTCCATCATTCCACCACCATTTTCACAACTTTTTTTTTATTACATCAAATTCAAAATCATCTCTTACAATTTTTTGTCTTGCTCATTCTCACATCACACTCACTCTCTCTAGCAACCATTGCTACTCTTCCAAACAACCTCATCTTTCTGCTTCCACCTCTAAAAATCAGCACCATGGCCTTGTTTGCTTTGGCAGTAGTGCTTCTATTGGCCTTCATTAGCTCTTCAAGTGCCACTTGGTGCGTTTGCAAGGATGGAAGTGATACCATACTGCAGAAGACCTTGGACTATGCTTGTGGAGCTGGAGCTGATTGTAACCCTTTGCACCAAAATGGCCCTTGTTTCCAACCCAACACTGTTAGAGCTCACTGTAACTATGCAGTTAACAGCTATTTCCAAAAGAAGGGCCAAGCTCAAGGGTCTTGTGACTTTGCAGGAACAGCCACTGTTACTGCATCAGATCCCA 466 0.4313 VHHSTTIFTTFFLLHQIQNHLLQFFVLLILTSHSLSLATIATLPNNLIFLLPPLKISTMALFALAVVLLLAFISSSSATWCVCKDGSDTILQKTLDYACGAGADCNPLHQNGPCFQPNTVRAHCNYAVNSYFQKKGQAQGSCDFAGTATVTASDP 155
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1984 155 SMART X8_cls 79 155 IPR012946 -
Pvu9g1984 155 PANTHER BETA-1,3 GLUCANASE 59 155 IPR044788 -
Pvu9g1984 155 Gene3D - 74 155 - -
Pvu9g1984 155 PANTHER PLASMODESMATA CALLOSE-BINDING PROTEIN 3 59 155 - -
Pvu9g1984 155 Pfam X8 domain 79 149 IPR012946 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1984 Pvu-Chr9 28416875 28417639 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1984 75 155 Glycoside Hydrolase AT2G01630 49.398 2.19e-22 90.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1984 - - vra:106757467 182.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu3g1914 3 39720708 39724920 Pvu9g1984 9 28416875 28417639 ECH
Pvu9g1984 9 28416875 28417639 Pvu9g1984 9 28416875 28417639 ECH