Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1978 ATGCAGCCACACAAGGAAGATGATAATGCTGAATGCTGCGATATATGTGGCGCTGTTGGTTGGAAAGAAACACTGCTTACTTGTTGTATATGCAAAGACAGACGTGAACATGCTTATTGCATGAGATTTAATACCTTAAAAATTCCAAGATACTGGGTCTGTGAGTCTTGCTCGTGTGTGTCAACTTCACCACCTGAAGAGGATCAGGGTATTAGTTCAAGGGCTTCTAAAATGCATCAAACTGGCAAAGCTGCGAAAGTGAAGTCACTTTCAGAGGATGAAGTCATTAGACTCTCTTCTGGTCCAGCAAGTTGTACTTTGCTAAGCTACGGGAAGACTGTTGTTGGGTCCAATTCATCCTTGATTCCATATTCAAATTCTCCTGTTTCATCATCTACTATGGAACTTGGGAAACATCCAAGAGATGATGAAATACACAAGAAAACAATGACTAGTAAACATGCCTCTTTCCCATCATCAAAAGGACCACCAAAGAAGTGTTTAGGAAAAAATCAGCGACCAATGGGTGGAGTGACACCTGCTAAAAAAGTTCAAATCCATGATCCTCAGAAAGAGAAGCCTGCAAAAGCGGCACCTTTTGAAGCTTTATCTGCAAGGAAATCTTCCCCTATTGTCTTCTCAGGTGGTACCCCTTTTGCTAATGCTGACTGTAACCAGTCTGACATTGAAAAACATGACCAGAGTATGTACCTCTCTTCACTTATCATTGATAACTATTTCCCTTCAATTACTCTTCCTTTAAAATTCACATTAAGCTCCAATCTGGGTCAATTCCAAATTATTCATACCGCTGGACTTAGCACATTTTATGATGGGTTTGAAGCCCAACCACCATTCATTGTTAATCGGAAAGCATTTGCATTTTCAAGAGAAATGCCATCGGTCCTTAAATTGGAGTCACATACTGCTTTGAAGGTCTTGACTGACATATTCCAAGATGATTCTCCTAAGCTTCAGGATATTGCATTGTACTTCTTTCCATCAGAACAAACTGAGAGGTCAAGAAAGAACCTGAACAGCTTATTGGGGTTTATGAATGCCGAAAAATCACTGCTGAAAAGTTATATTAATGGAGTGGAGTTGCTGATATTTACCTCAAATCAACTTGGCATGGACTCAAGGGGTGATATTGCTGCAGTAAACAATGGACAGTTCCTATGGGGATTCTTTCGCAAAAAGAAAATTGATAAAACTATTGAAAGATTTCTTGAAATGGAGCCAGTTAATATGGTGAGACCTGATCATCACCTTGGACTAGTTACACCCAAATTGGAGTTTGATAGCAATCTGGATGTTCCTCCAGGCTTTGAAGAGTTACCAAAAACGTCTTCTTGA 1356 0.3982 MQPHKEDDNAECCDICGAVGWKETLLTCCICKDRREHAYCMRFNTLKIPRYWVCESCSCVSTSPPEEDQGISSRASKMHQTGKAAKVKSLSEDEVIRLSSGPASCTLLSYGKTVVGSNSSLIPYSNSPVSSSTMELGKHPRDDEIHKKTMTSKHASFPSSKGPPKKCLGKNQRPMGGVTPAKKVQIHDPQKEKPAKAAPFEALSARKSSPIVFSGGTPFANADCNQSDIEKHDQSMYLSSLIIDNYFPSITLPLKFTLSSNLGQFQIIHTAGLSTFYDGFEAQPPFIVNRKAFAFSREMPSVLKLESHTALKVLTDIFQDDSPKLQDIALYFFPSEQTERSRKNLNSLLGFMNAEKSLLKSYINGVELLIFTSNQLGMDSRGDIAAVNNGQFLWGFFRKKKIDKTIERFLEMEPVNMVRPDHHLGLVTPKLEFDSNLDVPPGFEELPKTSS* 452
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1978 451 Gene3D Zinc/RING finger domain, C3HC4 (zinc finger) 1 86 IPR013083 -
Pvu9g1978 451 PANTHER - 10 409 - -
Pvu9g1978 451 MobiDBLite consensus disorder prediction 149 196 - -
Pvu9g1978 451 PANTHER ZINC ION-BINDING PROTEIN 10 409 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1978 Pvu-Chr9 28371958 28376135 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1978 - - vra:106757036 483.796