Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1977 ATGGCGGTTCAGAGGATCACTTCCAACGAAGCACAAGCTTCGAAGAATGTTTCGCATGACCATTTCTTCTTATGGAGAGAGTTTGTGTGGGGAGCTGTTGCTGGTGCTTTTGGAGAAGGAGTGATGCATCCAGTGGATACCATTAAAACCCGACTACAAAGTCAAGCTATTCTAAATGGACTTCAGAACCAGAAAAACATATTGCAGATGGTGCAACATGTCTGGCAGGTTGATGGACTAAAAGGCTTTTACAGGGGTGCAATACCTGGTATTACTGGATCTCTTGCAACTGGTGCAACATATTTTGGTGTCATAGAGTCCACAAAAAAGTGGATTGAGGATTCACATCCTAGACTTAGGGGCCACTGGGCGAATTTCATTGCTGGAGCTGTTGGAGACACTCTAGGTTCCTTTGTGTATGTTCCATGTGAAGTGATGAAACAACGCATGCAGGTTCAAGGCACAATTACATCTTGGAGTTCAGTTCCTGTGAAAAATGGCATTGCAATTAATCCTGGCACACAAATGTATGATTATTATACTGGAATGATCCACGCAGGCTGCTCAATATGGAAAACACAGGGCGTAAAGGGTTTATATGCAGGATATTTATCTACTCTGGCAAGGGACGTTCCGTTTGCTGGTCTAATGGTCATGTTCTATGAAGCTTTGAAAGACGTTACAAAATATGTAGAGCAAAAAGGGATATCTAGCCCAAATTGGCGTGTTAACCATTCATTCGAGGGACTGGTTCTAGGAGGATTAGCGGGTGGTCTCAGCGCATATCTTACTACTCCTTTGGATGTTGTTAAAACAAGACTGCAAGTGCAGGGTTCAACTTTGAGGTATAGTGGTTGGTTGGATGCAATTTGCAGTATATGGGCCACAGAAGGCATGAAGGGGATTTTCAGGGGTAGCATCCCCAGGATTACATGGTACATTCCGGCTTCAGCACTTACATTCATGGCTGTGGAATTTCTCAGAGATCATTTTAATGAAAGAGTGTCCAATGATAACTTGCGAGATGTTCGCAGATTATCAGTAGACAAGAAATCACTGCAGGAGGTTTCTTAG 1074 0.433 MAVQRITSNEAQASKNVSHDHFFLWREFVWGAVAGAFGEGVMHPVDTIKTRLQSQAILNGLQNQKNILQMVQHVWQVDGLKGFYRGAIPGITGSLATGATYFGVIESTKKWIEDSHPRLRGHWANFIAGAVGDTLGSFVYVPCEVMKQRMQVQGTITSWSSVPVKNGIAINPGTQMYDYYTGMIHAGCSIWKTQGVKGLYAGYLSTLARDVPFAGLMVMFYEALKDVTKYVEQKGISSPNWRVNHSFEGLVLGGLAGGLSAYLTTPLDVVKTRLQVQGSTLRYSGWLDAICSIWATEGMKGIFRGSIPRITWYIPASALTFMAVEFLRDHFNERVSNDNLRDVRRLSVDKKSLQEVS* 358
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1977 357 PANTHER MITOCHONDRIAL SUBSTRATE CARRIER FAMILY PROTEIN 1 352 - -
Pvu9g1977 357 ProSiteProfiles Solute carrier (Solcar) repeat profile. 22 111 IPR018108 -
Pvu9g1977 357 ProSiteProfiles Solute carrier (Solcar) repeat profile. 120 227 IPR018108 -
Pvu9g1977 357 PANTHER S-ADENOSYLMETHIONINE MITOCHONDRIAL CARRIER PROTEIN 1 352 - -
Pvu9g1977 357 PRINTS Mitochondrial carrier protein signature 27 40 IPR002067 GO:0055085
Pvu9g1977 357 PRINTS Mitochondrial carrier protein signature 40 54 IPR002067 GO:0055085
Pvu9g1977 357 PRINTS Mitochondrial carrier protein signature 200 218 IPR002067 GO:0055085
Pvu9g1977 357 PRINTS Mitochondrial carrier protein signature 253 275 IPR002067 GO:0055085
Pvu9g1977 357 SUPERFAMILY Mitochondrial carrier 21 327 IPR023395 -
Pvu9g1977 357 Gene3D Mitochondrial carrier domain 3 170 IPR023395 -
Pvu9g1977 357 Gene3D Mitochondrial carrier domain 171 346 IPR023395 -
Pvu9g1977 357 ProSiteProfiles Solute carrier (Solcar) repeat profile. 244 330 IPR018108 -
Pvu9g1977 357 Pfam Mitochondrial carrier protein 24 114 IPR018108 -
Pvu9g1977 357 Pfam Mitochondrial carrier protein 122 227 IPR018108 -
Pvu9g1977 357 Pfam Mitochondrial carrier protein 247 333 IPR018108 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1977 Pvu-Chr9 28358258 28366268 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1977 31 328 EF-hand Containing Proteins AT2G35800 29.097 4.45e-33 128
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1977 - - gmx:100790921 616.305
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1977 9 28358258 28366268 Pvu9g1977 9 28358258 28366268 ECH