Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1961 ATGGCCACTGAGACAGGTACAAGATCAAGACGGGTTGGAACAAGAACAAATTCATCATCACAAGCACCAGAGGTTGAAGAGATCGTACCTAATTCAGGATGGACAGACGATCATTCAGGCCATTTTCTTCTTGTTGATCTTCCTGAATTCAAGAAGGAGGAGGTGAGCCTTCAAGTTGATGGCTCCAGTGGGCACATAATAGTGAAAGGCGAAAGGTATACAAATGAACAGAAACGTGTTCACTTTGAGCTGAAATTTGCAGTGCCAGCAGATGCAGATATGGAGAACATATCCGGAAACTTTGATAATGAAATCCTTCACGTTCACGTCCCCAAGCGAGGTTCACAAGAGCACAGAGAAAGTGGCATAGAGAAAGCTTCAAATGGCCATTCTGAAAGGCCACATGAAACTGAAAATGAGGAACACGATGGTGTTAAAGAGGAACACGATGGTGTTACCCAAAGGTATCACACTGCACACGACGAGGACAGCGAGAATGAAGAAAGAAGAAACAAGCATACGCATAAGATAGATGGTTATTCTCAAAACTTAACAAGGAAGTGGGAGCAAAAACACATATCAAGAGCTATAGTGGAGGTTCTGATGAGAAACAAGGGAGTTGTTACAACTGCTGTTCTGGCTTTTTCCTTTGGTTTGTATGTATCTCATAAGTTCCATTCATGGAATCAACCATAA 696 0.4239 MATETGTRSRRVGTRTNSSSQAPEVEEIVPNSGWTDDHSGHFLLVDLPEFKKEEVSLQVDGSSGHIIVKGERYTNEQKRVHFELKFAVPADADMENISGNFDNEILHVHVPKRGSQEHRESGIEKASNGHSERPHETENEEHDGVKEEHDGVTQRYHTAHDEDSENEERRNKHTHKIDGYSQNLTRKWEQKHISRAIVEVLMRNKGVVTTAVLAFSFGLYVSHKFHSWNQP* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1961 231 Pfam Hsp20/alpha crystallin family 36 119 IPR002068 -
Pvu9g1961 231 MobiDBLite consensus disorder prediction 1 26 - -
Pvu9g1961 231 MobiDBLite consensus disorder prediction 112 176 - -
Pvu9g1961 231 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 23 126 IPR002068 -
Pvu9g1961 231 PANTHER HEAT SHOCK PROTEIN 26 13 230 IPR045045 -
Pvu9g1961 231 PANTHER INACTIVE PROTEIN RESTRICTED TEV MOVEMENT 2-LIKE 13 230 - -
Pvu9g1961 231 MobiDBLite consensus disorder prediction 1 33 - -
Pvu9g1961 231 Gene3D - 13 146 IPR008978 -
Pvu9g1961 231 CDD ACD_sHsps-like 34 112 - -
Pvu9g1961 231 SUPERFAMILY HSP20-like chaperones 28 123 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1961 Pvu-Chr9 28161940 28162895 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1961 - - gmx:100802285 291.967
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1961 9 28161940 28162895 Pvu9g1961 9 28161940 28162895 ECH