Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1947 ATGGCGTCGAGTATAGGGATGATGGATAGTGCATACTTTGTCGGCAGAAATGAGATTCTCACTTGGATCAACAATCGCCTTCAACTTAACCTCTCTCGCATTGAGGAGGCTGCATCTGGTGCTGTGCAATGCCAGATGATGGACATGACATATCCAGGGGTTGTTCCAATGCACAAGGTGAATTTTGATGCAAAGACAGAGTATGACATGATTCAGAATTACAAAGTTCTGCAGGATGTGTTCAACAAGCTGAAAATTGAGAAGCATATTGAAGTTGGAAGGCTTGTTAAAGGCCGACCTTTGGACAACTTGGAGTTCCTTCAATGGCTAAAACGTTACTGTGATTCTGTAAATGGAGGCATTATGAATGAGAACTATAATCCTGTTGAGCGTAGGGGTAGTAAGGGTGGAAACCGGAATGTCAAGGGTATAAAGAGCTCAAAATCACTGCAAACAAATACTATGAATCATTCTGGTTCAGGCGACTCACTCAGGTCCAAGCAATTGAGGTCAAGTGGAGGAGCAGACGGGGCTAATGCTTCAGCTGATATTCAGGCTTTGTCCAAGCAGGTTTCTGATCTCAAACTGTCAGTGGATCACTTGGAAAAAGAAAGAGACTTTTACTTTGCAAAACTAAGGGATATAGAAATTCTTTGTCAGGCTTCAGAACTGGAGGAAGATCCTATGTCTCAGGCAATTAAGAAGATATTGTATGCGGCTGATGCAAAAGGATCAGCATTAGATGAAGCTCAGGAATACCTTAATGAAGTCATCAATGGTGTTGAAGGTGAAGGTGAAGTTGAAGGTGAAGTTGAAGTTGAAGCAGAAACTGAAACCTGA 840 0.4226 MASSIGMMDSAYFVGRNEILTWINNRLQLNLSRIEEAASGAVQCQMMDMTYPGVVPMHKVNFDAKTEYDMIQNYKVLQDVFNKLKIEKHIEVGRLVKGRPLDNLEFLQWLKRYCDSVNGGIMNENYNPVERRGSKGGNRNVKGIKSSKSLQTNTMNHSGSGDSLRSKQLRSSGGADGANASADIQALSKQVSDLKLSVDHLEKERDFYFAKLRDIEILCQASELEEDPMSQAIKKILYAADAKGSALDEAQEYLNEVINGVEGEGEVEGEVEVEAETET* 280
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1947 279 PANTHER MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1B 1 266 - -
Pvu9g1947 279 Pfam EB1-like C-terminal motif 201 239 IPR004953 GO:0008017
Pvu9g1947 279 MobiDBLite consensus disorder prediction 128 179 - -
Pvu9g1947 279 Gene3D - 182 259 - -
Pvu9g1947 279 Pfam Calponin homology (CH) domain 16 114 IPR001715 GO:0005515
Pvu9g1947 279 Coils Coil 184 204 - -
Pvu9g1947 279 SUPERFAMILY Calponin-homology domain, CH-domain 5 132 IPR036872 -
Pvu9g1947 279 ProSiteProfiles Calponin homology (CH) domain profile. 13 115 IPR001715 GO:0005515
Pvu9g1947 279 MobiDBLite consensus disorder prediction 140 175 - -
Pvu9g1947 279 ProSiteProfiles EB1-C terminal (EB1-C) domain profile. 176 246 IPR004953 GO:0008017
Pvu9g1947 279 PANTHER MICROTUBULE-ASSOCIATED PROTEIN RP/EB FAMILY MEMBER 1 266 IPR027328 GO:0008017
Pvu9g1947 279 SUPERFAMILY EB1 dimerisation domain-like 184 242 IPR036133 GO:0008017
Pvu9g1947 279 Gene3D - 6 134 IPR036872 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1947 Pvu-Chr9 27940628 27946158 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1947 K10436 - gmx:100809691 484.567