Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1946 GATCAAATTGGTTATTGGGCAGTAAAAATTGTAACAGGCGTACCCGAAGCTATTCCTGTAATAGGATCGTCTTTGGTAGAGTTATTACGCGGAAGTTCCAGTGTGGGCCAATCTACCTTAACTCGTTTTTATAGTTTGCATACTTTTGTATTACCTCTTCTTACTGCTGTATTTATGTTTGGGGGCGAAGGATGGATTGTTAGTGTGGACGATTTGGAAGATATAATTGGAGGGCATGTATGGTTGGGTTCCATTTGTATACTTGGTGGAATCTGGCATATCTTAACCAAACCCTTTGCATGGGCTCGGCGTGCACTTGTATGGTCTGGAGAAGCTTACTTATCTTATAGTTTAGGTGCTTTATCTGTTTTTGGTTTTATTGCTTGTTGCTTTGTCTGGTTTAATAATACCGCTTATCCTAGTGAGTTTTATGGGCCCACTGGTCCAGAAGCTTCTCAAGCTCAAGCATTTACTTTTCTAGTTAGAGACCAACGAATTAGAAATACTTTTATTTTTGAAATGGTGCTAGATAGGGAAATAAAAAATAAAAGGGTGCTAGATAGGAAAATAAAAACAAAAGGGTGA 585 0.3846 DQIGYWAVKIVTGVPEAIPVIGSSLVELLRGSSSVGQSTLTRFYSLHTFVLPLLTAVFMFGGEGWIVSVDDLEDIIGGHVWLGSICILGGIWHILTKPFAWARRALVWSGEAYLSYSLGALSVFGFIACCFVWFNNTAYPSEFYGPTGPEASQAQAFTFLVRDQRIRNTFIFEMVLDREIKNKRVLDRKIKTKG* 195
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1946 194 SUPERFAMILY Photosystem II antenna protein-like 55 167 IPR036001 GO:0009521|GO:0009767|GO:0016020|GO:0016168|GO:0019684
Pvu9g1946 194 Pfam Cytochrome b/b6/petB 1 60 IPR005797 GO:0009055|GO:0016020|GO:0016491
Pvu9g1946 194 ProSiteProfiles Cytochrome b/b6 N-terminal region profile. 1 76 IPR005797 GO:0009055|GO:0016020|GO:0016491
Pvu9g1946 194 Gene3D photosystem ii from thermosynechococcus elongatus 146 172 IPR044900 -
Pvu9g1946 194 Pfam Photosystem II protein 60 153 IPR000932 GO:0009521|GO:0009767|GO:0016020|GO:0016168|GO:0019684
Pvu9g1946 194 Gene3D Cytochrome Bc1 Complex; Chain C 1 70 IPR027387 -
Pvu9g1946 194 PANTHER PHOTOSYSTEM II CP43 REACTION CENTER PROTEIN 58 166 IPR000932 GO:0009521|GO:0009767|GO:0016020|GO:0016168|GO:0019684
Pvu9g1946 194 PANTHER PHOTOSYSTEM II CP43 REACTION CENTER PROTEIN 58 166 - -
Pvu9g1946 194 SUPERFAMILY Transmembrane di-heme cytochromes 1 60 IPR016174 GO:0016020|GO:0022904
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1946 Pvu-Chr9 27939313 27939897 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1946 K02705 - pvu:PHAVU_009G188400g 398.667