Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1892 ATGGCTGGAGGGTCACTTGGAGACAACATAGGATTGAAGGAAGATGTCATCAAGAGGGTCTGCGGTTTAGCCTTCAAAGCTCACAAGCACAAGCCACAAGAGAAGCTCTACTTTTACGAAAAGGTTCAAATTTCTTCGGGAACTTACCATGTTTTCAGTTTCTCGGGATCTTGGGATGCCACTGAATGGTTTGTTAACAAACCCTTTGGAGGAACGAAGATAGATATTAACCTGTTCCCTTCTCTCAGAAGTATTGGCAACGACGAAGCTGCTTTGGTGAACGAAGGCTTCGCAAAGAGATTCGATCACATATTCAGAACTACCCCGTTTAAATCCGAGGTGAATAAGGCTATAGGAGATGGGAAGCAAGTGGTGTTTACGGGGCACTCCTCTGGTGCTGCTATGGCCATATTTGCAACATTTTGGGCCTTGGAAGAGTACCTTAATCCAACCAAAACTCAAAAACCTAAACCACCCTTCTGTGTCACTTTCGGGTCTCCCTTAATTGGTAATCATATACTCTCTCACGCTTCAAGGAGAGAAAAGTGGTCTCGCTATTTCATACACTTTGTTTTGAGATATGACATAGTGCCACGGATTTTGCTTGCTCCCTTATCTTCTATTCACCTAACTTTTGGTTCTATTCTCCAATCCTTGAATCCCAAGTCCAAAACTTCCACCCAAGATTCAACACGAGCTGAATTTTTCTCAACTGTGATGAGAAACACAGCCAGTGTTACAAGCCATGCTGCGTGCATTCTCATGGGCAGCACAAAATTGTTACTTGAGACAGTGGCAAATTTTGTTGACTTGAGTCCTTATAGGCCCTTTGGGACATATATTTTCTGCAATGGAAATGGACAGCTGATTGTGGTGAAAAACTCTGATGCTGTTTTGCAACTGTTATTCCACACTGCTCAGCTAAGCGATTTGAAAGACCTTCCAGAAATTGCTAATGATAGCATATTGCAACACCTGTCCTATGAGGCTGAGTTGGAATGTAGCTTGGGAATGCAGAACGTTGTGTACTTGGAACAACTTGAGCAACTTCCCTTGTCTTCTGATGGTTCTGATAGTGATGTTGCAACAATTAGCACAGCTTTGAATGGCCTTGGACTGAGCATAAGAGCAAGGCTGTGTCTACGCGCAGCAGGTGAGTTGGAAAAGCAGAAACAGAAAAACGAGGAGAAGATCAGTAAGGAGTTTGAGGATAAAGGTGTGGCAAGCATGAGGTATCTGGAGAAGTACAAAACAACATGCGAGGTGCAAAAGGGGAAGGGGTATTACGATGCCTTCAAGGTGCAGAAGGAGGAAAACGACTTCCAAGCAAATGTGAAGAGGCTTGTGCTGGCAGGGGTATGGGATGAGGTGATTGAGATGCTAAAGAGGTATGAACTCCCAGATGAGTTTGAAGGGAAGTCAGAATGGATTCAACATGGAACCATCTTTCGTCGCCTTGTGGAACCTCTAGACATATCCAATTACCATCGCCATTTGAAGAATGAGGACACGGGACCTTACATGATCTGGGGCAGGCCAAAACGGTATAAGTACACTCAAAGATGGTTGGAGCATGCCAAGAGGGTGCCAAAACCTGTTCCTATCACTGAATCCACCTTCTGGGCTGAAGTGGAAGAGCTTCATAGCTGGATCAATAGCAAGAAGAGTTTTGATGAAGTTAGGCAAAGGGTTGAGCAACTTGAATCTGACCTTAAAAAGTGGACTCATGCAAAGGAACTCACCAAGGATACTTTCTCAAAGGATCCTACCTTCATTAAGTTCTGGGAAATTCTCCCTCCTGAAAACAAGGCAAACATAGCTGCTCTTGTTGCTAATGTCAAAGGATTGTAA 1851 0.4398 MAGGSLGDNIGLKEDVIKRVCGLAFKAHKHKPQEKLYFYEKVQISSGTYHVFSFSGSWDATEWFVNKPFGGTKIDINLFPSLRSIGNDEAALVNEGFAKRFDHIFRTTPFKSEVNKAIGDGKQVVFTGHSSGAAMAIFATFWALEEYLNPTKTQKPKPPFCVTFGSPLIGNHILSHASRREKWSRYFIHFVLRYDIVPRILLAPLSSIHLTFGSILQSLNPKSKTSTQDSTRAEFFSTVMRNTASVTSHAACILMGSTKLLLETVANFVDLSPYRPFGTYIFCNGNGQLIVVKNSDAVLQLLFHTAQLSDLKDLPEIANDSILQHLSYEAELECSLGMQNVVYLEQLEQLPLSSDGSDSDVATISTALNGLGLSIRARLCLRAAGELEKQKQKNEEKISKEFEDKGVASMRYLEKYKTTCEVQKGKGYYDAFKVQKEENDFQANVKRLVLAGVWDEVIEMLKRYELPDEFEGKSEWIQHGTIFRRLVEPLDISNYHRHLKNEDTGPYMIWGRPKRYKYTQRWLEHAKRVPKPVPITESTFWAEVEELHSWINSKKSFDEVRQRVEQLESDLKKWTHAKELTKDTFSKDPTFIKFWEILPPENKANIAALVANVKGL* 617
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1892 616 CDD Lipase_3 51 213 - -
Pvu9g1892 616 PANTHER PROTEIN EDS1-RELATED 1 605 IPR044214 GO:0006952
Pvu9g1892 616 Pfam Lipase (class 3) 51 200 IPR002921 GO:0006629
Pvu9g1892 616 Coils Coil 557 584 - -
Pvu9g1892 616 Pfam Enhanced disease susceptibility 1 protein EP domain 412 596 IPR041266 -
Pvu9g1892 616 PANTHER ENHANCED DISEASE SUSCEPTIBILITY PROTEIN 1 605 - -
Pvu9g1892 616 SUPERFAMILY alpha/beta-Hydrolases 48 217 IPR029058 -
Pvu9g1892 616 Gene3D alpha/beta hydrolase 25 249 IPR029058 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1892 Pvu-Chr9 26988112 26990902 Tandem
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1892 77 214 Acyl Lipid Metabolism Gene Families AT5G14930 30.435 6.97e-09 55.1
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1892 K18875 - gmx:100778851 994.956
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1892 9 26988112 26990902 Pvu9g1892 9 26988112 26990902 ECH