Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1878 ATGAAGAGTTTGATTCTCTTTAGTTTTATTTTTGCTTGTAGTTTTCTTAGAAATGTTGTTTCAGAAAACAATAACTTTCCATATCAGGCTATTATAAATTTTGGTGATTCTTTAAGTGATACAGGAAATGCTGTATTTCATCGACCATTTCCACCTAATAGTCCTTATGGTTCAACATATTTTAAACATCCTGCAGGAAGAATGTCAAATGGAAGATTGATAATAGATTTTCTAGCTACGGCATATGGGGTACCCTTGTTGCCAGCATATCTGAATCTATCTAAAGGACAGAACGTGAAGAAAGGAGTAAATTTTGCATATTCTGGTACAACTGCACTTCCTAAAAGCTTTTTTGATAAAAGAGGAATTGATATACCACCAGCTGCTTATTCATTAGCCACTCAACTAGATTGGTTTCATAAACTCAAGCCCTCCCTTTGTAAAAGCAAAAAAGAATGTTATAATTACTTAAAAAATTCATTGGTTCTAGTTGGTGAGATTGGTGGGAATGACATTAATGCAATCGTCCCAAATAAAAATATTACAGAAATTCGAGAATTTGTTCCACATATTATTCAAACGATTTCTAGAACCGCTTCTGAACTAATTAAAGAAGGAGCAGTTCACCTAGTGATTCCAGGGAACTTTCCAATTGGGTGCAATTCTTGGGTTTTGAATACGGTGAAAAGTGATAAGGAAGATGATTATGACAAATTTGGGTGTTTGAAATCTTACAATGCTGCCATAAAGTACTATCATGAACACCTCAGAAAAGCCATAGAGACACTGAGAAAAAAAAACCCACATGTTAACATAACACATTTTGATTACTATGGTGCTGCCATACGTTTATTTCAAGCACCAGAAAAATACGGTTTTTTTTCTGGTAAAATCAAGACCTTTGAAGCATGTTGTGGAAAGGGTGGAAGTTATAATGTTAATGAAGTGTGTGGAACTGGTGACGCAAAAGCTTGTTCAGATCCTTCAAAACATATAAATTGGGATGGATATCATTTCACCGAAGCAGCATACAGGCTAGTAGCAAAAGGATTAATTGAGGGTCCTTTTGCTAATCCTCCTCTTAAACCTCCTCCTTTCAAGATTCCTAAGGAATGA 1116 0.3504 MKSLILFSFIFACSFLRNVVSENNNFPYQAIINFGDSLSDTGNAVFHRPFPPNSPYGSTYFKHPAGRMSNGRLIIDFLATAYGVPLLPAYLNLSKGQNVKKGVNFAYSGTTALPKSFFDKRGIDIPPAAYSLATQLDWFHKLKPSLCKSKKECYNYLKNSLVLVGEIGGNDINAIVPNKNITEIREFVPHIIQTISRTASELIKEGAVHLVIPGNFPIGCNSWVLNTVKSDKEDDYDKFGCLKSYNAAIKYYHEHLRKAIETLRKKNPHVNITHFDYYGAAIRLFQAPEKYGFFSGKIKTFEACCGKGGSYNVNEVCGTGDAKACSDPSKHINWDGYHFTEAAYRLVAKGLIEGPFANPPLKPPPFKIPKE* 372
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1878 371 Gene3D SGNH hydrolase 18 354 IPR036514 -
Pvu9g1878 371 CDD SGNH_plant_lipase_like 30 355 IPR035669 -
Pvu9g1878 371 SUPERFAMILY SGNH hydrolase 31 352 - -
Pvu9g1878 371 Pfam GDSL-like Lipase/Acylhydrolase 31 349 IPR001087 GO:0016788
Pvu9g1878 371 PANTHER ZINC FINGER FYVE DOMAIN CONTAINING PROTEIN 4 368 - -
Pvu9g1878 371 PANTHER GDSL-LIKE LIPASE/ACYLHYDROLASE 4 368 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1878 Pvu-Chr9 26760965 26762682 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1878 30 354 Acyl Lipid Metabolism Gene Families AT4G10950 26.647 1.28e-23 99.4
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1878 - - gmx:100794616 512.686