Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1830 ATGAATGCGCGCGGAGAACTCAGTTCTCCGGATCCGTTGGATTCGTTTCCTCCGTTACGGGTTCGGGAATCGGACGGTGCGTCGGACGATTCCGAGTTCGAGAGGTATTGCAGCGCCAACTCGGTGATGGGAACGCCCAGCACCAGCATGAGCATGTGCAGCGCTGTCACGCTCTTCCACGATTTCTCCGATTACGATTTCGCCTCTTCCGCGGAGGGTTTCGAGAGTTTCAGTTTGGGAAAGGGAACGGCGGAGGCGAATCGTGCCGGCGACCGAAGACGGAGTCTGCGGTACGGTTCCAGTGGATTGGAGCTGTACGGTGATTGCAGTGAGGAGCTCGCTTTGACTGCGCTCGATTCATCGGAGTTGATTGGGTTTAACCGGATCGGAGTGTCGAATGGGAACGGTGAAGTGAGTGTTGGAGAAGGTGGTAAAAATGGTTTTGAAATTCAAATTGATAAAAGGGAAGAGGAAGAAGAAGAAGAAGAAGAATTGGAAGAGTTATCGGAGGGTGATGATTCTATGTATAACTATGACAGTGATGGTAATGGTGATGATGATGGTGATGGTGGGAAGGAAATTTATTTGACGGAAAACATGGGTTATTGTGAAGAAACGGAAGTGAGAAACGAGAACTCTTTGTTTATGAACACTTCCGTGGCCTATGGTTCGCTAGACTTGGATGATTTTTTGCTGCAAAACGGTCCCGTTTGTGTCATGTCTGATCTATTCCACACTCAGCGAAAAAAGAATGATAGATTGAATTCGGGTTCTGGTCAAAAGGAGCAAGGGCAGAATGAAAAGAACATGGTTATAGTCAATGAAGTTGAAGAAACTAAAGATATAGGTTATTCTGATGCCGTAGAAGAGGTTAGGGACAGAGAAGTTGTTATGCCTGTTTACTTAGAGGAAAGTTCTGCACCAATCGATTCTCCGCGCAGTGTCAAAATGCCGGTCCGAGGTTCTGGGGATTTGGTTAGTTGTCCTGAAATTTCTTCGGTTGCCGAGGTGGATGAAGTTGATTTGGAGCTGCGGGAGAAAGAAGCTCCTCGCAATATGGGTTTGGGTGTTAATGGTTGTGGTTGGACGGAGAAGGGGAATGTGAACAGTGAAGAAGCTATTGCAGCTAGTGATGCTTATGGTGTAAAGTCGGTGCTTGATGATTCTATGTTCCGGCTTGATCACATTACTGATGATAGCCAATTTCATAAAAGTTATTCCAATACATCCAGCCATCTTGAGAACGTTATTTCAAAATCATTTGAGTGTATTGAATCAACTGCGCAGCTGCCAGACAGTGGAATGAAGAAAACGTTAGAGAGTTCGTCCACTTCAACAAATCTCTTACAGAAAAGTCCTGTGGTATCTAAGACAGAAGACTTTGAGCTAAGTGAATTTTATGACGAGGTTGTTCAGGAAATGGAAGAAATTTTACTGGAATCAGTGGATTCTCCTGGGGCTAGGCTTTCCATTGGTAACAGATTGGCTGAGCCTCAATTTTCTATGCCTTCAAGAGATGGTGGGTTGACTGCTTCTACTTCTAGCACAGATGATGCTTACCTGCTAGTTCAACGGCCAAGAAGAATTGATAGGATTGAAGTGGTAGGTGCGAGGCAGAAGAAAGGGGATGTTTCTTTCAGTGAAAGATTGGTTGGAGTGAAGGAATACACTGTGTACAAAATTAAAGTGTGGAGTGGCAAGGACCAGTGGGAGGTTGAAAGGCGATATCGTGATTTCTTCACTCTCTATAGTTGCATGAAAGCATTATTCAAAGAGCAAGGCTGGAAACTACCTTTGCCATGGTCTTCTGTTGAGAAGGAAACCCAGATATTTAGAAGTGCATCTCCTGATATTATTGTGAAGAGAAGTGTCCTCATTCAAGAGTGTTTACAGTCTATTATCCATTCCAGGTTCTCTTTAAGTCCTCCTAGGGCATTGACATGGTTTTTGTCCCATCAAGATTCGTACCCTATTTCACCTGTGTCAAATGTACTGGTGTCTCAGTCTTCTTTTACAAGATGGAAAAGTTTTCGAAACGTTTCCAATTTAGGAAAGACAATTTCACTCATTGTTGAAATTCCACCAAACAAATCTATCAAACAGTTGTTAGAAGCACAGCATCATACCTGTGCTGGATGCCATAAGCATTTTGATGATGGAAAGACTTTGATTTGGGATTTTGTACAGACATTTGGATGGGGGAAGCCTCGACTTTGTGAATACACGGGCCAATTGTTTTGTTATTCTTGCCACACAAATGAGACTGCAGTCTTGCCAGCCAGAGTTTTACATCACTGGGATTTTACTCATTATCATGTTTCTCAGCTGGCAAAATCCTATCTAGATTCTATATATGAACAGCCCATGCTCTGTGTCACTGCCGTTAATCCCTTCCTTTTGTCAAAGGTCCCAGCTTTACTTCATATTATGAGTGTCAGAAAAAAGATAGGTATAATGCTTCCATACGTTCGCTGCCCGTTTCGGAGGGCCATTAACAGAGGACTTGGAAACAGGAGATATCTTCTTGAAAGCAATGACTTTTTTGCTCTTAGAGATTTGATTGATCTTTCCAGAGGAGTCTTTGCTGCACTTCCTGTGATGGTGGAAACTGTGTCAAGGAAAATCATGGAACACATTACTGACCAATGCCTTGTATGCTGTGATGTGGGAGACCCGTGTAATGCCCGACAAGATTGTAGTGACCCATCTTCTCTAATTTTCCCATTTCAGGAAGACGAGATTGAAAGGTGCAAAGCTTGCCAGTTGGTTTTCCACAAGCATTGCTTTAGAAAACTTGCAAATTGTCCTTGTGGGGCTCAACTCAGATTGAAGGAGACAAGGAGCTTAACTAACAGAGGAAGCCAAAGGGGGGGTGGTGGTGGTGGTGAAAGCAGAGGAGCTTTGGACTTATTAGGCAGAGGACTGAGTTCTGGGTTGTCAACAAGGTTCCTGTCTGGATTATTTACGAATGAAAAGGCAGAGAAGAGTAGTAGGGAGCATAAAGACGAAAATATTATTTTAATGGGCTCCTTACCTACCACTTCTTTATGA 3051 0.4369 MNARGELSSPDPLDSFPPLRVRESDGASDDSEFERYCSANSVMGTPSTSMSMCSAVTLFHDFSDYDFASSAEGFESFSLGKGTAEANRAGDRRRSLRYGSSGLELYGDCSEELALTALDSSELIGFNRIGVSNGNGEVSVGEGGKNGFEIQIDKREEEEEEEEELEELSEGDDSMYNYDSDGNGDDDGDGGKEIYLTENMGYCEETEVRNENSLFMNTSVAYGSLDLDDFLLQNGPVCVMSDLFHTQRKKNDRLNSGSGQKEQGQNEKNMVIVNEVEETKDIGYSDAVEEVRDREVVMPVYLEESSAPIDSPRSVKMPVRGSGDLVSCPEISSVAEVDEVDLELREKEAPRNMGLGVNGCGWTEKGNVNSEEAIAASDAYGVKSVLDDSMFRLDHITDDSQFHKSYSNTSSHLENVISKSFECIESTAQLPDSGMKKTLESSSTSTNLLQKSPVVSKTEDFELSEFYDEVVQEMEEILLESVDSPGARLSIGNRLAEPQFSMPSRDGGLTASTSSTDDAYLLVQRPRRIDRIEVVGARQKKGDVSFSERLVGVKEYTVYKIKVWSGKDQWEVERRYRDFFTLYSCMKALFKEQGWKLPLPWSSVEKETQIFRSASPDIIVKRSVLIQECLQSIIHSRFSLSPPRALTWFLSHQDSYPISPVSNVLVSQSSFTRWKSFRNVSNLGKTISLIVEIPPNKSIKQLLEAQHHTCAGCHKHFDDGKTLIWDFVQTFGWGKPRLCEYTGQLFCYSCHTNETAVLPARVLHHWDFTHYHVSQLAKSYLDSIYEQPMLCVTAVNPFLLSKVPALLHIMSVRKKIGIMLPYVRCPFRRAINRGLGNRRYLLESNDFFALRDLIDLSRGVFAALPVMVETVSRKIMEHITDQCLVCCDVGDPCNARQDCSDPSSLIFPFQEDEIERCKACQLVFHKHCFRKLANCPCGAQLRLKETRSLTNRGSQRGGGGGGESRGALDLLGRGLSSGLSTRFLSGLFTNEKAEKSSREHKDENIILMGSLPTTSL* 1017
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1830 1016 Pfam Putative zinc-RING and/or ribbon 737 940 IPR025258 -
Pvu9g1830 1016 CDD PX_domain 544 643 - -
Pvu9g1830 1016 PANTHER DIFFERENTIALLY EXPRESSED IN FDCP 8 HOMOLOG 43 1016 - -
Pvu9g1830 1016 SMART DUF4206_2 737 944 IPR025258 -
Pvu9g1830 1016 ProSiteProfiles PX domain profile. 537 656 IPR001683 GO:0035091
Pvu9g1830 1016 PANTHER PLECKSTRIN HOMOLOGY DOMAIN CONTAINING PROTEIN 43 1016 - -
Pvu9g1830 1016 Coils Coil 145 171 - -
Pvu9g1830 1016 MobiDBLite consensus disorder prediction 155 184 - -
Pvu9g1830 1016 MobiDBLite consensus disorder prediction 1 32 - -
Pvu9g1830 1016 Gene3D - 544 655 IPR036871 GO:0035091
Pvu9g1830 1016 Pfam PX domain 564 652 IPR001683 GO:0035091
Pvu9g1830 1016 MobiDBLite consensus disorder prediction 155 192 - -
Pvu9g1830 1016 SUPERFAMILY PX domain 549 654 IPR036871 GO:0035091
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1830 - - vra:106762619 1695.63
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1830 9 25906574 25913423 Pvu9g1830 9 25906574 25913423 ECH