Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1823 ATGGCTTACTCCGATTCTGCGCCTTCTGTCCCTCTCCGATGGAACTTCTCTCAAGTACTCGGCCAACAACTTCCCAGTGAGCCTCTCCAAAACGACGACATCATAACAACCGTTGCGTTCGAGAAGCGCGGCGATTATCTCGCCGTTGGCGATCGAGGTGGACGCATTGTAATATTCGAACGAGATGATCGGAACACGAATGTTTCGAGTAATCGAAGGGATTTGGAGCAGAGGGACTTCGCTTTGCGGCATCCCAAATTTCGCTACAAGACAGAATTTCAGAGCCACGAACCCGAGTTTGATTGCCTAAAGAGTGTGGAAATTGAAGAGAAGATTAACAAAGTAAGGTGGTGGATGACCCACGATAACTTGCAATTTATTCTTTCAACCAACGATAAAACAATTAAATTGTGGAAGGTTAAGGAGTATAAGGTGAAACATGTTAAAGAAATGGCCCCTCCTTTGTGCTCAGAAAATATGCTTTTGGCTGAAAGAAGTTTCGTACCAGGGCTGGAAACCACTTCTGCTGCTAATGGCTATCGTTTGGAATGGATAGAGAAGACGCCTCAGAATCATTTGCCACCTCAGGATGTTGATAGCGAGATTGGTGGAATAGAAAACCCTTTTCGCTCAAAGTGCCAAAAGGTCATAACATCAGCTGAATTTCATCCTTTACATTGTAACCTCCTTGCATATAGCAGCTCACAAGGTTTAATTCGTCTATCTGATTTGCGACATGCAGCAATATGTGACCATGCTTCTAGAATATTTCAACATCGAGAGAGTAATGGATCAAAGTCATTTTTTACAGAAATCACTTCTTCCATCTCAGACATAAAGTTTTTAAATGATGGCCAGCATCTTCTTAGTCGCAATTACATGAATATGAAGCTTTGGGACATGCGTAGGGAGTCATCTCCAGTTGCAATATTCAAAATTCACGAGCATCTGCGTCCTAAGTTGCGAGAACTCTATAATAATGACTGCATATTTGATAAATTCGGGTGCTGCTTTAGTGGTGATGGGCTCCATTTTGCATCTGGTTCTTATAGCAATCTCTTGCGGATATTCTCCCCAGGTTCTGGAAGGGAGGAAGGTATCAAACTAGAAATTAGAGGAAATTCTGACAGTGTACCTACGGATTCTCCTCCTCCACCACCTCTTCAAGTTTATAGTCGTCGTCAGTCATCCCATCATCCATAG 1203 0.4298 MAYSDSAPSVPLRWNFSQVLGQQLPSEPLQNDDIITTVAFEKRGDYLAVGDRGGRIVIFERDDRNTNVSSNRRDLEQRDFALRHPKFRYKTEFQSHEPEFDCLKSVEIEEKINKVRWWMTHDNLQFILSTNDKTIKLWKVKEYKVKHVKEMAPPLCSENMLLAERSFVPGLETTSAANGYRLEWIEKTPQNHLPPQDVDSEIGGIENPFRSKCQKVITSAEFHPLHCNLLAYSSSQGLIRLSDLRHAAICDHASRIFQHRESNGSKSFFTEITSSISDIKFLNDGQHLLSRNYMNMKLWDMRRESSPVAIFKIHEHLRPKLRELYNNDCIFDKFGCCFSGDGLHFASGSYSNLLRIFSPGSGREEGIKLEIRGNSDSVPTDSPPPPPLQVYSRRQSSHHP* 401
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1823 400 MobiDBLite consensus disorder prediction 371 400 - -
Pvu9g1823 400 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 9 216 IPR000009 GO:0000159|GO:0019888
Pvu9g1823 400 PANTHER PROTEIN PHOSPHATASE PP2A REGULATORY SUBUNIT B 215 381 IPR000009 GO:0000159|GO:0019888
Pvu9g1823 400 PIRSF PPA2_B55 4 182 IPR000009 GO:0000159|GO:0019888
Pvu9g1823 400 PIRSF PPA2_B55 210 397 IPR000009 GO:0000159|GO:0019888
Pvu9g1823 400 SUPERFAMILY WD40 repeat-like 32 364 IPR036322 GO:0005515
Pvu9g1823 400 SMART WD40_4 99 139 IPR001680 GO:0005515
Pvu9g1823 400 SMART WD40_4 207 243 IPR001680 GO:0005515
Pvu9g1823 400 SMART WD40_4 22 60 IPR001680 GO:0005515
Pvu9g1823 400 SMART WD40_4 304 358 IPR001680 GO:0005515
Pvu9g1823 400 SMART WD40_4 262 300 IPR001680 GO:0005515
Pvu9g1823 400 PANTHER OS02G0617600 PROTEIN 9 216 - -
Pvu9g1823 400 PANTHER OS02G0617600 PROTEIN 215 381 - -
Pvu9g1823 400 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 39 59 IPR000009 GO:0000159|GO:0019888
Pvu9g1823 400 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 220 248 IPR000009 GO:0000159|GO:0019888
Pvu9g1823 400 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 249 276 IPR000009 GO:0000159|GO:0019888
Pvu9g1823 400 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 277 304 IPR000009 GO:0000159|GO:0019888
Pvu9g1823 400 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 305 330 IPR000009 GO:0000159|GO:0019888
Pvu9g1823 400 PRINTS Protein phosphatase PP2A 55kDa regulatory subunit signature 331 357 IPR000009 GO:0000159|GO:0019888
Pvu9g1823 400 Gene3D - 2 156 IPR015943 GO:0005515
Pvu9g1823 400 Gene3D - 172 381 IPR015943 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1823 Pvu-Chr9 25784451 25796490 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1823 K04354 - twl:119986324 419.083
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1823 9 25784451 25796490 Pvu9g1823 9 25784451 25796490 ECH