LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Pvu9g1769	ATGTTCAACAAAGCTTTATTCCACTTCATATTGCTATATATATATGGTATTAATACAACCACGAATACTCAAGCCAAAACCTATTTCCCTCCCACTGAGTTTTCTGATATCTGCAGCCATTTCAGCAACATGAGTAACCACACTCGCCAGCTAACAGCTACTACCCCTAAGATAAACCAAAGGAAGGAGCGACGCATGTTCTCCACTTCTGATGACAGTGCCATGACCAAGCAAGTTCAGGCCACACATGCCCCTGATGGCCGTGAAATTGATGTCAAACCTATTCTACAAATTGTGGATGAAATTCTGGTTCGGTTTATTGCTCGCACTGTTGAGGGTTATGAAGTGAAAAGAGACCAAGATGCATTGGAGATGACTGCTGTTCTGGCTGAATTTGACATGCTTGACTCGCTGGCTTACATCATAAACAAAATTTCGTGTGAGCTATCATGCAAATGCTCGGGAGGTGGAGATGCACATTCATCGACGATGGTGTTACTGGGCTACATGTCTAGCTATGCATGGCATGCGAAAGTTGTGCTAACCTTAGCAGCCTTTGCTGTGATTTTTGGAGAGTTTTGGCTTGTTGCTCAGTTGAGTGCTGAAAATACTCTTGCCAAGTCTGTGGCCCTCCTCAAGCAACTGCCAGATCTTGCTGAGAATTTCATGTCCTTGAAGCCCCATTTTGAAGCACTCATTAGGCTCGTGAAGGCTGCAATGGAAGTAACCACCTGTATCGTTCAATTCAAGGAGCTTCCATCTGAATACATTTCAGAGGACACACCTCCCATGTCTGTTGCCAGTACTCACATTCCTATTGCTTCCTATTGGGTCATCAGAAGTATTGTGGCTTGTGCCTCTCAAATTGCTAGTCTCATAGGCACAAGAAATGAGTCCATTTCATCTACCACTGAGGCATGGGAATTATCTAGTCTTGCTCACAAAGTTACTAGTATTCATGAGCACCTAAAGAACCAACTGATTCTTTGCTACCAATATATAGATGACAAGAGGCATATAGAGGCCTTCCACAATCTGACACGTCTTTTTGAGACAGTCCATGTGGACAACATGAAAATTCTGAGAGCACTGATATATGCAAAGGATGATATCCTTCCACTTGTGGATGGAACTACAAAATCAAGGGCTAGTCTGGAGGTACTAAGGAGGAAACATGTGTTGCTGCTCATATCAGATCTTGATCTTTCACAAGAAGAGATCCTGGTACTTGATAATTTGTACAAAGATGCACGATCGAGGGGTGACACACACTATGAGATGGTTTGGATCCCAGTTGTAGACAAAGCGGTCTGGAATGATGTGAACAAACAGAAGTTTGAGTATTTGCAGTCATTGATGGCATGGTACAGTGTCTGTGATCCTTTCATCATTGAACCATCAGCAGTTAAGTACATAAAAGAAGTGTGGAATTTCTCAAAGACCGCTATTCTAGTGGCCCTTGATCCACAAGGCAGATTGTCCTCCCCTAATGCCGTCCATATGATATGGATTTGGGGCAATTTGGCCTTCCCCTTCACAAGTGAGAAAGAAGAATCATTGTGGAAGCAAGAGATTTGGAGCCTTGAGCTGCTTGTCGATGGCATTGATCCTACAGTTCTAGAATGGATGGCAGACGGAAAACTGGTATGCCTATATGGAGGTGAAGACCTGGAGTGGATTGAGAAATTCACAGCAACAGCATTGAGTGTGGCAAAAGCTGGGAAGTTCCAGCTGGAGATGGTGTACGTGGGAAAGAGCAACGCGAAGGAGCGGATGCAGAAGATGATAAAAACGTTCAACACGAGAAAGTTCAGTTACTTTTGGCCTAACGTGACGTCCATTTGGTTCTTCTGGACCCGTTTGGAGAGCATGCTGTACTCCAAGTTGCAGCATGGAAGGACGGTGGAAAACGACGAGGTCATGAGCGAAGTGATGACTGTGCTGAGCTTCGACGGCAGTGATCGAGGGTGGGCGATTTTCTGCAACGGCGCCACTGAAATGGCCAGAGCCAAGGGGGACAGTGCTCTGGTATGCTTGCAGGACTTTGACAAGTGGAAGGATAGAGTTGAGGAAGAAGGTGTGGTGCAAGCAATGAAAGATTATCTCGACAAAAACAAACCCCCACATCACTGCAATCGCTTGATCCTTCCTGGGAGCACTGGTGGCATACCCCAGAAAGTTGTGTGTGCTGAATGTGGACGCCAAATGGAGAAATACTTCATGTATCGTTGTTGTGTGGAGTAG	2244	0.4505	MFNKALFHFILLYIYGINTTTNTQAKTYFPPTEFSDICSHFSNMSNHTRQLTATTPKINQRKERRMFSTSDDSAMTKQVQATHAPDGREIDVKPILQIVDEILVRFIARTVEGYEVKRDQDALEMTAVLAEFDMLDSLAYIINKISCELSCKCSGGGDAHSSTMVLLGYMSSYAWHAKVVLTLAAFAVIFGEFWLVAQLSAENTLAKSVALLKQLPDLAENFMSLKPHFEALIRLVKAAMEVTTCIVQFKELPSEYISEDTPPMSVASTHIPIASYWVIRSIVACASQIASLIGTRNESISSTTEAWELSSLAHKVTSIHEHLKNQLILCYQYIDDKRHIEAFHNLTRLFETVHVDNMKILRALIYAKDDILPLVDGTTKSRASLEVLRRKHVLLLISDLDLSQEEILVLDNLYKDARSRGDTHYEMVWIPVVDKAVWNDVNKQKFEYLQSLMAWYSVCDPFIIEPSAVKYIKEVWNFSKTAILVALDPQGRLSSPNAVHMIWIWGNLAFPFTSEKEESLWKQEIWSLELLVDGIDPTVLEWMADGKLVCLYGGEDLEWIEKFTATALSVAKAGKFQLEMVYVGKSNAKERMQKMIKTFNTRKFSYFWPNVTSIWFFWTRLESMLYSKLQHGRTVENDEVMSEVMTVLSFDGSDRGWAIFCNGATEMARAKGDSALVCLQDFDKWKDRVEEEGVVQAMKDYLDKNKPPHHCNRLILPGSTGGIPQKVVCAECGRQMEKYFMYRCCVE*	748

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Pvu9g1769	747	PANTHER	PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE	53	746	IPR039299	GO:0010088
	Pvu9g1769	747	Pfam	Sieve element occlusion N-terminus	70	354	IPR027942	-
	Pvu9g1769	747	PANTHER	PROTEIN SIEVE ELEMENT OCCLUSION B-LIKE	53	746	-	-
	Pvu9g1769	747	Pfam	Sieve element occlusion C-terminus	516	745	IPR027944	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Pvu9g1769	Pvu-Chr9	24995623	25000261	Dispersed/Transposed

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Pvu9g1769	-		-	gmx:100811452	1333.16

Event-related genes

Select	Gene_1	Chr_1	Start_1	End_1	Gene_2	Chr_2	Start_2	End_2	Event_name
	Pvu9g1769	9	24995623	25000261	Pvu9g1769	9	24995623	25000261	ECH