Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1756 ATGGAGGAGAAGTTGGGAGTAGCAGAAGAGACCTCTAACTCCAGGGTTCTTCACCAGACGACTTCCAAGCTCGTCGTTTTGGCCGACCTCAACGTTGATCCTCCCGAAGCCGACGACGACGACTCTTCCCTCCTCCCTCCTCCATCGATTGTAACTCAAGATAAAAGTTTGTTGTCCAAAGAAACTGATAGCATTGAAGGTGAAAGCAAAAAGTTGAACAAACTGGGCAAATGTCGTTCCAGACTTAGCAAGACAGATTCTTCTCTTGATTGTGGAGCTGATGCAGATGGTGATCAACATGTTCAAGGACCTCCTTCATCTCGAGAGGAAAAAGTTAGCAGTGTGAAGACTGGCTTGGTTCATGTTGCAAAGAAGATGCCCAAAAATGCTCATGCTCATTTTATACTTGGCTTGATGTACCAAAGATTAAACCAGCCTCAAAAGGCTGTGTTGGCTTATGAGAAGGCAGAAGAGATCTTGCTCAGACCAGAGGCTGAGATTGATAGGCCAGAGTTGCTTTCGTTAGTTCAGATTCACCATGCACAGTGCCTGTTACTAGAAAGTTCATTGGAAAATAATTCTGATAAAGAACTTGAACCTCGTGAACTTGAAGAGATTCTTTCTAAGCTGAAAGAGTCAATGCAATCAGATGTTAGACAGACAGCTGTATGGAACACACTGGGTTTTATCCTTCTTAAAACTGGTCGCGTGCAGAGTGCTATCTCAGTTTTGTCATCATTGTTGGCCATTGCACCAGAGAACTATGATTGCCTAGGAAATCTTGGGATAGCTTATCTTAAAACTGGGAATTTGGAATTATCTGCAAAATGTTTCCAACAATTGATTTTAAAAGATCAAAATCATCCTGCAGCTTTGGTAAATTATGCTGCCCTTCTTTTGAGTAAATATGCTTCAGTTGTGGCAGGTCCTGGTGCAAGTGCCTCTGAAGATGCAATGGCTGATCAGATCATGGCTGCAAATGTTGCCAAGGAATGTTTGTTGGCCGCAGTTAAAGCAGATAGCAAATCAGCCCATCTATGGGCAAATCTTGCCTATGCATTTTCTGTTAGTGGTGATCATCGAAGTTCCAGCAAGTGCTTGGAGAAGGCTGCCAAACTGGAACCCAATTGCATGTCTACTCGATATGCTGTTGCTATCCATCGAATAAAGGAGGCAGAAAGATCGCAAGATCGTAGTGAACTGCTTTCATGTGCTGGAAATGAAATGGCCTCTATAATAAGAGATGGTGATTCATCCCTGGTTGAGATTCCAATAGCATGGGCTGGGCTTGCCATGGTTCACAAGGCTCAACATGAGATAGTGGCAGCATATGAGAGTGAACAGCACGGGTTGAGAGAAGTTGAAGAGCGTGCTGTTTGCAGTTTAAAGCAGGCTATAGCAGAAGATCCGAATGATGCGGTGCAGTGGCATCAGCTCGGCGTTCATAGTCTCTGTGCTCGGCAATTCAAAACATCACAAAAGTACCTCAAAACTGCTGTTGCCTGTGACCAGGATTGCAGCTATGCATGGTCTAACCTAGGTGTCTCACTACAACTATCAGAGGAACCAGCACAAGCTGAAGAAGTGTACAAGAAAGCCTTGTCTTTGGCAACAACTCAACAAGCGCATGCTATATTATCCAACTTGGGAATTATCTATCGCCATCAGAAACAATATCAACGTGCGAAGGCTATGTGTACAAAGTCACTTGAACTGCAGCCTGGGTATGCTCCTGCATTCAACAATCTGGGTCTTGTGTTTGTTGCTGAGGGTCTTTTGGAAGAAGCCAAGTATTGTTTCAACAAAGCTCTCCAATCAGATCCATTACTGGATGCAGCTAAGTCTAATATGATTAAGGCAGTTGTCATGTCAAAGTTATGCAAAGGCCTCTCCTCATGCGCTCTTAAAGAATGA 1914 0.4383 MEEKLGVAEETSNSRVLHQTTSKLVVLADLNVDPPEADDDDSSLLPPPSIVTQDKSLLSKETDSIEGESKKLNKLGKCRSRLSKTDSSLDCGADADGDQHVQGPPSSREEKVSSVKTGLVHVAKKMPKNAHAHFILGLMYQRLNQPQKAVLAYEKAEEILLRPEAEIDRPELLSLVQIHHAQCLLLESSLENNSDKELEPRELEEILSKLKESMQSDVRQTAVWNTLGFILLKTGRVQSAISVLSSLLAIAPENYDCLGNLGIAYLKTGNLELSAKCFQQLILKDQNHPAALVNYAALLLSKYASVVAGPGASASEDAMADQIMAANVAKECLLAAVKADSKSAHLWANLAYAFSVSGDHRSSSKCLEKAAKLEPNCMSTRYAVAIHRIKEAERSQDRSELLSCAGNEMASIIRDGDSSLVEIPIAWAGLAMVHKAQHEIVAAYESEQHGLREVEERAVCSLKQAIAEDPNDAVQWHQLGVHSLCARQFKTSQKYLKTAVACDQDCSYAWSNLGVSLQLSEEPAQAEEVYKKALSLATTQQAHAILSNLGIIYRHQKQYQRAKAMCTKSLELQPGYAPAFNNLGLVFVAEGLLEEAKYCFNKALQSDPLLDAAKSNMIKAVVMSKLCKGLSSCALKE* 638
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1756 637 Pfam Tetratricopeptide repeat 231 290 - -
Pvu9g1756 637 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN 9 634 - -
Pvu9g1756 637 Gene3D Tetratricopeptide repeat domain 542 628 IPR011990 GO:0005515
Pvu9g1756 637 Gene3D Tetratricopeptide repeat domain 322 411 IPR011990 GO:0005515
Pvu9g1756 637 MobiDBLite consensus disorder prediction 31 66 - -
Pvu9g1756 637 MobiDBLite consensus disorder prediction 86 113 - -
Pvu9g1756 637 ProSiteProfiles TPR repeat profile. 344 377 IPR019734 GO:0005515
Pvu9g1756 637 ProSiteProfiles TPR repeat profile. 577 610 IPR019734 GO:0005515
Pvu9g1756 637 SUPERFAMILY TPR-like 125 380 IPR011990 GO:0005515
Pvu9g1756 637 Gene3D Tetratricopeptide repeat domain 66 318 IPR011990 GO:0005515
Pvu9g1756 637 ProSiteProfiles TPR repeat profile. 221 254 IPR019734 GO:0005515
Pvu9g1756 637 PANTHER TETRATRICOPEPTIDE REPEAT (TPR)-CONTAINING PROTEIN-RELATED 9 634 - -
Pvu9g1756 637 Pfam Tetratricopeptide repeat 543 605 - -
Pvu9g1756 637 Gene3D Tetratricopeptide repeat domain 456 541 IPR011990 GO:0005515
Pvu9g1756 637 ProSiteProfiles TPR repeat profile. 543 576 IPR019734 GO:0005515
Pvu9g1756 637 SUPERFAMILY HCP-like 329 608 - -
Pvu9g1756 637 SMART tpr_5 221 254 IPR019734 GO:0005515
Pvu9g1756 637 SMART tpr_5 507 540 IPR019734 GO:0005515
Pvu9g1756 637 SMART tpr_5 130 163 IPR019734 GO:0005515
Pvu9g1756 637 SMART tpr_5 577 610 IPR019734 GO:0005515
Pvu9g1756 637 SMART tpr_5 255 288 IPR019734 GO:0005515
Pvu9g1756 637 SMART tpr_5 344 377 IPR019734 GO:0005515
Pvu9g1756 637 SMART tpr_5 473 506 IPR019734 GO:0005515
Pvu9g1756 637 SMART tpr_5 424 457 IPR019734 GO:0005515
Pvu9g1756 637 SMART tpr_5 543 576 IPR019734 GO:0005515
Pvu9g1756 637 Pfam Tetratricopeptide repeat 130 159 IPR019734 GO:0005515
Pvu9g1756 637 Pfam Tetratricopeptide repeat 344 377 IPR019734 GO:0005515
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1756 458 609 Glycosyltransferase AT3G04240 26.144 4.90e-08 54.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1756 - - gmx:100820184 1059.28
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1756 9 24823368 24830356 Pvu9g1756 9 24823368 24830356 ECH