Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1740 GTTATTATTTCCGCACCCAGTAAGGATGCTCCCATGTTTGTTGTTGGTGTTAACGAGCACGAGTACAAGGCAGAGCTTGATATTATCTCCAATGCCAGCTGCACAACCAACTGCCTTGCTCCACTCGCCAAGGTTATTAATGACAGATTTGGTATTGTTGAGGGTTTGATGACCACAGTTCATTCCATCACTGCTACCCAGAAGACTGTTGATGGACCATCAGCCAAAGACTGGAGAGGTGGAAGAGCTGCTTCATTTAACATCATTCCTAGCAGCACTGGAGCTGCCAAGGCTGTTGGGAAAGTCCTCCCTTCTTTGAATGGAAAATTGACTGGAATGGCATTCCGAGTTCCCACCGTGGATGTCTCCGTTGTTGACCTCACAGTGAGGCTGGAGAAGAGTGCCACCTATGAGGACATTAAAAAGGCTATCAAGGAGGAATCAGAGGGCAAGTTGAAGGGAATCCTTGGTTACACTGAAGATGATGTGGTCTCCACCGACTTTGTGGGTGACAGCAGATCAAGTATTTTTGATGCCAAGGCTGGAATAGCATTGAACGATAATTTTGTGAAGCTTGTCATGTGGTATGACAATGAGTGGGGATACAGCTCACGTGTGATTGATCTGCTTGTTCACGTTGCCAAGATCTCTCTTTAA 657 0.4627 VIISAPSKDAPMFVVGVNEHEYKAELDIISNASCTTNCLAPLAKVINDRFGIVEGLMTTVHSITATQKTVDGPSAKDWRGGRAASFNIIPSSTGAAKAVGKVLPSLNGKLTGMAFRVPTVDVSVVDLTVRLEKSATYEDIKKAIKEESEGKLKGILGYTEDDVVSTDFVGDSRSSIFDAKAGIALNDNFVKLVMWYDNEWGYSSRVIDLLVHVAKISL* 219
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1740 218 Pfam Glyceraldehyde 3-phosphate dehydrogenase, C-terminal domain 39 196 IPR020829 GO:0016620
Pvu9g1740 218 Gene3D Dihydrodipicolinate Reductase; domain 2 32 198 - -
Pvu9g1740 218 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 1 56 IPR036291 -
Pvu9g1740 218 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 28 46 IPR020831 GO:0016620
Pvu9g1740 218 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 55 71 IPR020831 GO:0016620
Pvu9g1740 218 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 112 129 IPR020831 GO:0016620
Pvu9g1740 218 PRINTS Glyceraldehyde-3-phosphate dehydrogenase signature 152 167 IPR020831 GO:0016620
Pvu9g1740 218 PANTHER GLYCERALDEHYDE-3-PHOSPHATE DEHYDROGENASE 1 215 - -
Pvu9g1740 218 ProSitePatterns Glyceraldehyde 3-phosphate dehydrogenase active site. 32 39 IPR020830 GO:0016620
Pvu9g1740 218 PANTHER GLYCERALDEHYDE 3-PHOSPHATE DEHYDROGENASE 1 215 IPR020831 GO:0016620
Pvu9g1740 218 SUPERFAMILY Glyceraldehyde-3-phosphate dehydrogenase-like, C-terminal domain 33 196 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1740 Pvu-Chr9 24593611 24595359 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1740 K00134 - gmx:100037457 406.371