Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1735 ATGGCACCAACTGTACCTATAGAGTTTGCTGGACAAAAGGAATCCAGAAAGTACTCTCATTCACAGAATATGGGGAAGTCTAGGAAATATTCTAAAGCTTATGCTGCTGGCTTTGTTCCTGATTTTCGGCATGCTGTTGAGACCATGGGTGAATCGGAAGGGTTGGGTAGCTTGGGAAGGGTTGATACGGAGCTGACGGCATCAGCAGATTCTTGTGCACCAAAGAGGAAATGTCCTGGTTTGAATACCGGTGGTTATGGCAGTTTTGATGTACCTTTTCAACTTTTCTCTTTGTCAAGGATGTCGGGTTTTGAGAGAAAGGATTTGAAAACGAGGTTGACATGGGAACTTGAACAGGTAAAGGAATTTCAGAAGAAAGTTGAGGCTATGAACTCAAATGTTGTTGGATTGTCACCCTCCAGTGACATTAGGAGCTGCAGTGCAGGGCAGAAGAGGCCTAAGCTGGAGAGCCAGCATATGACAATGGAAGTATCGGTGCCACATGGTAAGAAGAGGCCCTTACCAGCAAATAGTGGTCCCAAGACAAAGAAAACTATATCTGGGCGTCCTGAATTTCCAAAACCTGCTGCGCCAATGACCTCACATGCTGCGATGCTGAAACCGTGTGAGTCATTGCTTAACCGATTGATGACTCATCAATTTGGTTGGGTTTTTAACACACCAGTTGATGTTGTTAAATTGAACATTCCGGATTATTTCACTGTAATCAAACATCCAATGGATTTGGGTACTGTGAAGAGGAGAATAACCTCTGGTGACTACTTAAATCTCATGGATTTTGCTGCTGATGTGCGACTGACTTTCTCAAATGCAATGACTTATAATCCACCAGGCAATGACGTACACCTCATGGCAGATACCCTTAATAAAATTTTTGAATCGAGATGGAAGGCAATAGAAAAAAAAATTCCTGTTATTGACTGTGTCCCATCTGAGCCTTCTAGAACTACTCGCGTGGATACAGAATTTTCTGATCGAGTTCCTCCCACAAAAAAGAAGAAAATTACATCAAATAATGTCAAGCCTGAGCCTCTTAAAAAAATCATGACTGTAGAGGAGAAGCATAAATTGAGTGTAGAGTTGGAGGCAATGCTTGGGGAGCTGCCTGATGCTATTGTTGATTTCTTGAGAGAGCAAAGTTATAATGCAGGGCAAACCAATGATGATGAAATTGAAATTGATATCGATGCTCTTAGTGATGATACCCTGTTCAAACTGCGGAAGCTTCTAGATGATTATTTGCTGGAGAAGAAAAGATCCCAGGCAAAAGCCGGACAATGTGAAATGGAGCCTCTGAATGAATCAGGGTTCAGTAATTCTCCGGTGCAGGGCAAAGGCAATGAACTGGTTGAGGAGGATGTGGACATTGTTGGTGGAAATGATCCTCCTATTTCAACTTATCCTCCATTAGAGATTGAAAAAGATGGTAACCATAGAAACAGTAAATGTAGTAGTTCAAGCAGCTCTAGTAGTGAATCTGGCACTTCATCCAGTGATTCAGACTCGGGTAGTTCATCTGGCAGTGAGTTGGATATAGCTAAAACATCAGAGCCTCTTAGTGGTACCAAGGAAAATGTAGGATCTGGCTTGACTTTAGATCAAAACAAAGGGGATCCTGGTAATTCAGAAACTGGAAAGGATTCAACAAATGTGGGAGGCCAAGTTGATCACACTTCCCAGAGTAAGCTTGTTGCTTCTGAACCAGAAAGCCATCAAGAGGGGGAGAGTGCTGCATCTAAGAGGCAAGTCTCTCCCGAAAAGCTCTACCGTGCAGCTTTATTAAGGAGCCGTTTTGCTGACACCATTCTTAAAGCTCAAGAGAAAGCCCTTGAAAAGGATGAAAAGCGGGATCCTGAAAAACTTAGGATAGAGCGAGAAGATCTTGAACGGCGGCAGAAAGAAGAAAAAGCACGGTTACAGGCAGAGGCAAAGGCTGCAGAAGAAGCTCGGAGGAAGGCTGAAGCAGAAGCTGCAGCTGAAGCCAAAAGGAAAAGGGAACTGGAAAGAGAAGCAGCCCGTCAAGCTTTGCAAAAGATGGAGAAAACTGTTGATATCAACGAGAGCAGTCAATTTTTGGAAGATCTTGAGATGCTGAGTGCTGTACATGACGAACCTATGCCAAGTTTCAAAGAGGAGACAAGCACAGATCAACCTCAAAATGGATTGGGTAGGATCAAGCTACAGGGGAATCCCTTAGAACAGCTAGGATTGTATATGAAGGATGATGATGATGAGGAGGAGGAGGAGGAGGAGGAGGAACTGCCTGCGAGTGGTGCTGCAGGACCATCAAATGATGTCGAAGAAGGAGAAATTGACTGA 2340 0.4363 MAPTVPIEFAGQKESRKYSHSQNMGKSRKYSKAYAAGFVPDFRHAVETMGESEGLGSLGRVDTELTASADSCAPKRKCPGLNTGGYGSFDVPFQLFSLSRMSGFERKDLKTRLTWELEQVKEFQKKVEAMNSNVVGLSPSSDIRSCSAGQKRPKLESQHMTMEVSVPHGKKRPLPANSGPKTKKTISGRPEFPKPAAPMTSHAAMLKPCESLLNRLMTHQFGWVFNTPVDVVKLNIPDYFTVIKHPMDLGTVKRRITSGDYLNLMDFAADVRLTFSNAMTYNPPGNDVHLMADTLNKIFESRWKAIEKKIPVIDCVPSEPSRTTRVDTEFSDRVPPTKKKKITSNNVKPEPLKKIMTVEEKHKLSVELEAMLGELPDAIVDFLREQSYNAGQTNDDEIEIDIDALSDDTLFKLRKLLDDYLLEKKRSQAKAGQCEMEPLNESGFSNSPVQGKGNELVEEDVDIVGGNDPPISTYPPLEIEKDGNHRNSKCSSSSSSSSESGTSSSDSDSGSSSGSELDIAKTSEPLSGTKENVGSGLTLDQNKGDPGNSETGKDSTNVGGQVDHTSQSKLVASEPESHQEGESAASKRQVSPEKLYRAALLRSRFADTILKAQEKALEKDEKRDPEKLRIEREDLERRQKEEKARLQAEAKAAEEARRKAEAEAAAEAKRKRELEREAARQALQKMEKTVDINESSQFLEDLEMLSAVHDEPMPSFKEETSTDQPQNGLGRIKLQGNPLEQLGLYMKDDDDEEEEEEEEELPASGAAGPSNDVEEGEID* 780
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1735 779 MobiDBLite consensus disorder prediction 488 574 - -
Pvu9g1735 779 MobiDBLite consensus disorder prediction 324 344 - -
Pvu9g1735 779 ProSiteProfiles NET domain profile. 346 428 IPR027353 -
Pvu9g1735 779 Coils Coil 632 689 - -
Pvu9g1735 779 Gene3D - 194 313 IPR036427 GO:0005515
Pvu9g1735 779 MobiDBLite consensus disorder prediction 429 592 - -
Pvu9g1735 779 MobiDBLite consensus disorder prediction 705 779 - -
Pvu9g1735 779 PRINTS Bromodomain signature 220 233 IPR001487 GO:0005515
Pvu9g1735 779 PRINTS Bromodomain signature 236 252 IPR001487 GO:0005515
Pvu9g1735 779 PRINTS Bromodomain signature 252 270 IPR001487 GO:0005515
Pvu9g1735 779 PRINTS Bromodomain signature 270 289 IPR001487 GO:0005515
Pvu9g1735 779 PANTHER TRANSCRIPTION FACTOR GTE8 62 759 - -
Pvu9g1735 779 Gene3D - 350 428 IPR038336 -
Pvu9g1735 779 MobiDBLite consensus disorder prediction 615 684 - -
Pvu9g1735 779 MobiDBLite consensus disorder prediction 165 190 - -
Pvu9g1735 779 MobiDBLite consensus disorder prediction 746 762 - -
Pvu9g1735 779 SMART bromo_6 198 308 IPR001487 GO:0005515
Pvu9g1735 779 SUPERFAMILY Bromodomain 182 312 IPR036427 GO:0005515
Pvu9g1735 779 Pfam Bromodomain 209 292 IPR001487 GO:0005515
Pvu9g1735 779 PANTHER TRANSCRIPTION FACTOR GTE10 62 759 - -
Pvu9g1735 779 MobiDBLite consensus disorder prediction 325 344 - -
Pvu9g1735 779 Pfam Bromodomain extra-terminal - transcription regulation 356 418 IPR027353 -
Pvu9g1735 779 MobiDBLite consensus disorder prediction 615 688 - -
Pvu9g1735 779 CDD Bromo_plant1 205 303 IPR037377 -
Pvu9g1735 779 ProSiteProfiles Bromodomain profile. 217 289 IPR001487 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1735 Pvu-Chr9 24544952 24549955 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1735 - - gmx:100776368 1178.31
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1735 9 24544952 24549955 Pvu9g1735 9 24544952 24549955 ECH