Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1715 ATGGCGGCCACCGCTTCTTCAAGAACCCCATTTTCTGCTTGTTCTTGCTACTCCGCCTTTCCCAAACGCATTGTCAGATCCACCGTCCCTCTCTCTCACCCAACCCTCACTAAGCCCTCTCACGCTCACCCTCTCGCAATCTCATGTTCCCACCCCAAGCCTCCGGCAGCCACACCACCCGCCTTGGTCCTGTCTTCTCCGGCCGCCGAGCCTTTCCTCTCGCGGTTCGCTCCAGACGAGCCGCGTAAGGGTGCGGACATCCTCGTCGAGGCGCTGGAGCGGCAGGGCGTCTCCACCGTCTTCGCGTACCCCGGCGGCGCGTCGATGGAGATCCACCAGGCGCTCACGCGCACTGCGGCCATTCGAAACGTGCTCCCGCGTCACGAGCAGGGCGGCGTCTTCGCGGCTGAGGGCTACGCGCGGTCGACGGGGCTTCCCGGCGTGTGCATCGCCACATCCGGCCCCGGTGCCACCAACCTCGTGAGCGGCCTAGCGGACGCGATGATGGACAGCGTGCCGGTGGTGGCCATCACCGGGCAGGAAACCCCCATCGTGGAAGTTTCCAGATCCATCACCAAACACAACTACCTCATCCTCGACGTCGACGACATTCCTCAGGTCGTCAGTGAGGCCTTCTTCATCGCTACTTCGGGCCGGCCCGGCCCAGTCCTGATCGACGTCCCCAAAGACGTTCAGCAGCAACTGGCGGTTCCTAATTGGGACATTCCGGTTAAGCTCCCCGGGTACACCGCCAGGCTGCCCAAGCTCTCCAGTGAGGCCGAACTGGAGCAGATTGTCAGACTCATATTGGAGGCCCAGAAGCCCGTTTTGTATGTGGGAGGTGGCTCTTTGAACTCCAGCGCAGAGTTAAAGCGGTTTGTGGAACTCACTGGGATTCCTGTTGCCAGCACATTAATGGGCCTTGGAACTTTTCCTATTGGCCACGAGCATTCCCTTCAAATGTTGGGCATGCATGGTACTGTTTATGCCAACTACGCCGTTGATAAGAGTGATTTGTTGCTTGCCTTTGGGGTGAGGTTTGACGACCGTGTCACCGGGAAGCTCGAGGCTTTTGCTAGTAGGGCTAAGATTGTTCACATTGATATTGATTCCGCTGAGATTGGGAAGAATAAGCAGCCACACGTATCGGTTTGTGGGGATTTGAAGTTGGCATTGCAGGGGATTAACAGGATTTTGGAGAATATGGGGGTGAAGGGGAAGGTTGATTTTGGAGCTTGGAGAGAAGAGATTAATGTGCAGAAAGGAAAGTTTCCTTTGAGTTATAAGACGTTTGATGATGGGATTTCTCCTCAGTACGCCATTGAGGTTCTCGATGAGTTGACAAATGGGGATGCTATAATTAGCACTGGGGTAGGGCAGCATCAAATGTGGGCTGCGCAATTCTACAAGTACAAGAGGCCTAGACAGTGGTTGACGTCAGGGGGTCTTGGAGCTATGGGTTTTGGATTGCCTGCGGCTATGGGTGCTGCTGTTGGGAACCCTGGTGCTGTGGTGGTTGACATTGATGGGGATGGGAGTTTCATAATGAATGTTCAAGAGTTGGCCACTATAAGAGTGGAGAATATCCCTGTGAAGATATTGTTGTTGAATAATCAGCACTTGGGTATGGTGGTTCAGTGGGAGGATCGGTTCTACAAGGCCAACAGAGCTCACACCTATCTGGGAGATCCCTCGAGGGAGAATGAGATATTCCCCAACATGCTAAAGTTTGCAGATGCTTGTGGGATACCCGCAGTGCGTGTGACTAAGAAGGAAGAGCTTAGAGGAGAAATTCAGAAAATGTTGGACACCCCTGGCCCCTATCTTCTTGAGGTCATAGTCCCTCATCAGGAACACGTGTTGCCGATGATTCCCAGTAATGGATCCTTTGAGGATGTGATTACTGAGGGGGATGGTAGAACAAGGTACTGA 1932 0.543 MAATASSRTPFSACSCYSAFPKRIVRSTVPLSHPTLTKPSHAHPLAISCSHPKPPAATPPALVLSSPAAEPFLSRFAPDEPRKGADILVEALERQGVSTVFAYPGGASMEIHQALTRTAAIRNVLPRHEQGGVFAAEGYARSTGLPGVCIATSGPGATNLVSGLADAMMDSVPVVAITGQETPIVEVSRSITKHNYLILDVDDIPQVVSEAFFIATSGRPGPVLIDVPKDVQQQLAVPNWDIPVKLPGYTARLPKLSSEAELEQIVRLILEAQKPVLYVGGGSLNSSAELKRFVELTGIPVASTLMGLGTFPIGHEHSLQMLGMHGTVYANYAVDKSDLLLAFGVRFDDRVTGKLEAFASRAKIVHIDIDSAEIGKNKQPHVSVCGDLKLALQGINRILENMGVKGKVDFGAWREEINVQKGKFPLSYKTFDDGISPQYAIEVLDELTNGDAIISTGVGQHQMWAAQFYKYKRPRQWLTSGGLGAMGFGLPAAMGAAVGNPGAVVVDIDGDGSFIMNVQELATIRVENIPVKILLLNNQHLGMVVQWEDRFYKANRAHTYLGDPSRENEIFPNMLKFADACGIPAVRVTKKEELRGEIQKMLDTPGPYLLEVIVPHQEHVLPMIPSNGSFEDVITEGDGRTRY* 644
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1715 643 Pfam Thiamine pyrophosphate enzyme, N-terminal TPP binding domain 83 234 IPR012001 GO:0030976
Pvu9g1715 643 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 78 249 IPR029061 -
Pvu9g1715 643 Pfam Thiamine pyrophosphate enzyme, C-terminal TPP binding domain 457 612 IPR011766 GO:0003824|GO:0030976
Pvu9g1715 643 SUPERFAMILY Thiamin diphosphate-binding fold (THDP-binding) 433 634 IPR029061 -
Pvu9g1715 643 ProSitePatterns Thiamine pyrophosphate enzymes signature. 494 513 IPR000399 GO:0000287|GO:0030976
Pvu9g1715 643 Gene3D - 427 613 - -
Pvu9g1715 643 CDD TPP_AHAS 435 626 IPR039368 GO:0030976
Pvu9g1715 643 PANTHER THIAMINE PYROPHOSPHATE ENZYMES 55 642 IPR045229 -
Pvu9g1715 643 Gene3D - 72 253 - -
Pvu9g1715 643 Pfam Thiamine pyrophosphate enzyme, central domain 263 393 IPR012000 GO:0000287|GO:0030976
Pvu9g1715 643 Gene3D - 262 426 - -
Pvu9g1715 643 PANTHER ACETOLACTATE SYNTHASE 55 642 - -
Pvu9g1715 643 CDD TPP_PYR_POX_like 86 229 - -
Pvu9g1715 643 TIGRFAM acolac_lg: acetolactate synthase, large subunit, biosynthetic type 83 635 IPR012846 GO:0000287|GO:0003984|GO:0009082|GO:0030976|GO:0050660
Pvu9g1715 643 SUPERFAMILY DHS-like NAD/FAD-binding domain 260 425 IPR029035 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1715 Pvu-Chr9 24249336 24251303 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1715 K01652 - gmx:100782250 1097.42
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1715 9 24249336 24251303 Pvu9g1715 9 24249336 24251303 ECH