Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1708 ATGATGTTGCTTCCTGGCATAACACACTCAATTGTTGTAGAGTCTAATGGAAGCTATATCAAATCAGCTACTTTTTTGTCTGAAAAGTTTGAAGTGGGACCAGGAAAAATTGTAGTAAAAACATTATTAGATATTGACTTTCCAAAGGGTCACATTGGGGTCAAGAGTTTTGATGTTGAAGTAGTTGATGAAAATGGTAAATCTGTACCTTTGTATGAAACTTACCTTCATCATTGGTTTGCTGTAAAATATATTGAAAACATTACCATGTCAAACTACATTAAAGAATCTCACGACCTTCGCAACGGTATCGAATTCGAAAGAAATGATGGTATGTGCCAAGGTTTTTTGCTTCCACACTATTGGGGCTTGGGAGGAGAATCACGAGGAACATCCTCAAATCTTCCAGATCCTTTTGCAGTTGAATTAGGTAATCCTACAAAATTAAAGGATGGGTTTAAAGAAAAATGGTTATTTAGCATCATGGTTATTGATACTCGTGGTGCACATGATAGAAAAGGTTGTTCAGAGTGTAGGTGTAAGCTTTTAAATCTCCCAACCAACTTTTACAATGTCACAATGGGCATTAATGGTCAATTATTGCCAAGAAATTATAAAGGAGGACTCTTTTGTTGTCAAGATAACTTGCAATGCAAATTAAGAAATGATTTCCATGGCCCAATAAGAAATCTTTCCCTAAGATACAAAATAAGGTGGGTTGATTGGGATGAACACCAGGTGCCTCTTAGGTTCTATATACTTGATTCAACTGATCGTGTAAGATCAAATGGTTCTACACCAATTCATGATTGCCAGGCGGAATATACTATTTCAAGAAATCATGACAATGACTTCCCTCACGTTAAGAAAGCAAACATCCCAATGACAAAAGGTGGTTATCTTATATATGGCACTGCTCATATGCACACTGGTGTTGTCAACACTACTTTATATGGACAGGATGGAAGGGTTTTATGCACTTCAAATCCAAAATATGGAACAGGAAAAGAAGCAGGAAATGAAAATGGTTACCTAGTTGGAATGTCAGTTTGCTATCCAAAACCTGGTTCCATCAAGATTAAAGACGGCGAAATTCTAACATTAGAATCCATATACGAAAACAAGTTTCGTACTGGAGCTATGGGACATTTTTATATTTACTTGGCAGATCAAATACCAAACAAGGATTTGAATATTTGA 1200 0.3608 MMLLPGITHSIVVESNGSYIKSATFLSEKFEVGPGKIVVKTLLDIDFPKGHIGVKSFDVEVVDENGKSVPLYETYLHHWFAVKYIENITMSNYIKESHDLRNGIEFERNDGMCQGFLLPHYWGLGGESRGTSSNLPDPFAVELGNPTKLKDGFKEKWLFSIMVIDTRGAHDRKGCSECRCKLLNLPTNFYNVTMGINGQLLPRNYKGGLFCCQDNLQCKLRNDFHGPIRNLSLRYKIRWVDWDEHQVPLRFYILDSTDRVRSNGSTPIHDCQAEYTISRNHDNDFPHVKKANIPMTKGGYLIYGTAHMHTGVVNTTLYGQDGRVLCTSNPKYGTGKEAGNENGYLVGMSVCYPKPGSIKIKDGEILTLESIYENKFRTGAMGHFYIYLADQIPNKDLNI* 400
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1708 399 Pfam Stress up-regulated Nod 19 20 391 IPR011692 -
Pvu9g1708 399 PANTHER STRESS UP-REGULATED NOD 19 PROTEIN 1 394 IPR011692 -
Pvu9g1708 399 PANTHER STRESS UP-REGULATED NOD 19-RELATED 1 394 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1708 Pvu-Chr9 24174927 24176452 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1708 - - pvu:PHAVU_011G142100g 725.317