Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1705 ATGGAGAAGCCATCGTCGTCGCGAAAATCGAGCACGAAGGTGAAAGCTTCAAGCGATGTGAACACAAGCTTGAGTATGCTGAATGAGGATCTTCTTCAGAACATTCTAGCGAGGCTTCCTGCTCTACCATTCGCTTCCGCAGCCTGCGTCAGCAAAGCATGGAACTCTCTCTGCAATCGCATCCTCTCTCGTCCCAAACTCTCTTCCGCGCTTTCTATCAACCCTTCGCTCCCCGATGCTGTGAATGAGGTTGTGCAAAGGGTTCTGTCGGAGCCAATTCGACCACATTTTGCTATTGCTAATACTGGAACTGGATTCTGCACTTCCAGGACTCTGCAGCTTATTAGAAAGTCATTGGGATCTAATATTCCTGTTATTGTTACCGTGGCAAATGGTATTATTGGAAGGGATGCTGTTACTGATGAGTTTAAAGAGGTCAAATGGGGTGCCCTTTTTAGTGGCTTTGGTGGGGAAGCATATGCAAAGTTTATAAACGAAGGCTTAGTTTTGACTGTTGGCTACTTGCCTGGATTGAAAGTTGAAGCTGTGCCGTTGCGGCGGCCACCAAAGTCATCTCAAGCACCATGGGTTGACAATTTTATTAAGGATATTAAGGAATATTCAGCCATTGTCTCCGGTCGCCCATTCCCTGTTGGGATCATATTGTTTGGAGAAGAAAACAGTGACATGAAATTGGTTCTGGAGAAATTGGATTATGCCATGCCTATGGACACAATCGTTGTGGGTGATGAGAGAGGCTCCTTTGACTTTGTACACAAAAGTGGGAATGATTCTAGAATCATTTGTAGTAAAAAAGGAAATGTAGAAGCTGTTGCTCTCGTATTTGCTCAGGACAGAGACAGGTCTTTGGGAACTATTAGGTTTCATGTTGCATTATCAAATGGTGTTTCAACTGTGGGTCCCAGATACAAGGCAGCCTCAGTTAGACCAAACACCATTGACGGTGCAACATGGCTAACTGCCAGGAGGGAAGGGCAACAGGAACTTCTTGATGGTCAGAGTATTCTACTTGATATCAATAATTTGCTGGACAATCATATTGAATCTCCTGATTTGTACATTGGGGTAATTAAACATAGGAAGTTCTCCACGGGAGCAGAGAAGCCAATGCCAAGAACTTGCGTTGCATATCATGGAATTGTGGGAGGTGATGAAGAGTATCTATATGTTGATGGCATTGGCATAAAAACAGGAGATTTCTTTCAGTTCTACTATTCAGATCCCAATACTGCCTTATCTTCATTAACCAAGGTCCATGATGCCCTCAAGAGTATTACACTGGAAAGAGATTCTAAGAGTTTCAAGGGTAATGGAGACAATGCTGCCAATGTTTTTGGGGGTTTAATTTTTGCTTGTTATGGCCGGGGTGAATCATTCTTTGGACGTCACAATGTTGATAGCTCCCCTTTCTTGGAGAATTTTCCTGGAGTGCCAGTTTCTGGAATATTTTGTGGTGGAGAAATGGTGCGCCCCTGTACCACTGTGATTGGTCAATGTGAAGGAGCAAGCCCCGTTAGTTGTTGTCTGCATGTTTACAGCACTGTCTACTTGGCAATGTCTTATACTCCTCCTTCTGTGGAAGATTAG 1608 0.4397 MEKPSSSRKSSTKVKASSDVNTSLSMLNEDLLQNILARLPALPFASAACVSKAWNSLCNRILSRPKLSSALSINPSLPDAVNEVVQRVLSEPIRPHFAIANTGTGFCTSRTLQLIRKSLGSNIPVIVTVANGIIGRDAVTDEFKEVKWGALFSGFGGEAYAKFINEGLVLTVGYLPGLKVEAVPLRRPPKSSQAPWVDNFIKDIKEYSAIVSGRPFPVGIILFGEENSDMKLVLEKLDYAMPMDTIVVGDERGSFDFVHKSGNDSRIICSKKGNVEAVALVFAQDRDRSLGTIRFHVALSNGVSTVGPRYKAASVRPNTIDGATWLTARREGQQELLDGQSILLDINNLLDNHIESPDLYIGVIKHRKFSTGAEKPMPRTCVAYHGIVGGDEEYLYVDGIGIKTGDFFQFYYSDPNTALSSLTKVHDALKSITLERDSKSFKGNGDNAANVFGGLIFACYGRGESFFGRHNVDSSPFLENFPGVPVSGIFCGGEMVRPCTTVIGQCEGASPVSCCLHVYSTVYLAMSYTPPSVED* 536
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1705 535 Pfam F-box domain 24 62 IPR001810 GO:0005515
Pvu9g1705 535 Pfam FIST N domain 109 320 IPR013702 -
Pvu9g1705 535 SMART FIST_C_2 342 498 IPR019494 -
Pvu9g1705 535 SUPERFAMILY F-box domain 23 59 IPR036047 GO:0005515
Pvu9g1705 535 SMART fbox_2 27 67 IPR001810 GO:0005515
Pvu9g1705 535 Pfam FIST C domain 401 496 IPR019494 -
Pvu9g1705 535 PANTHER SKP2-LIKE, FIST C DOMAIN, FIST DOMAIN, N-TERMINAL ISOFORM 1 23 534 - -
Pvu9g1705 535 PANTHER F-BOX ONLY PROTEIN 22 23 534 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1705 - - gmx:100815778 961.829