Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1701 ATGGCCGCAATCAGCAACATCCGTTTACAATTCCCACGGAATTTAAACGATTCTAAGAAGAATGTGAGGTTTTATGCTCCATGCAATATTACTAACGTGTTTAATAATAAACGAAGATTCTTGTCGGTGACCGCAAATTATAGTGAAAGTCCTCGAAAAATGGACACTGCCAACAGAGTAAATGTGAATGGAACACACGTGGCAGAGGCTCCTCTACAAGCAGGAAAGTTCGCCAAAGAAAGTGCAGCAGATGAAGCTATTGTTACCAGCTTGCGTGGAAGGTTTGTGGAGGATAAGTTTGTATTTAGGCAAATTTTTGTTATCAGGTCTTACGAAATTGGACCAGATAAAACTGCCACCATGGAGACACTCATGAATTTTCTTCAGGAAACTGCTTTAAATCATGTCACTAGCTCTGGGATTGGGGGAGAAGGATTTGGAGCAACCCGCGAGATGAGCCTTCGAAAGCTCATTTGGGTTGTTACTCGTATTCAACTTCAAGTTCAGAAATATAACAAATGGGGAGACGAAATTGAAGTTGATACTTGGGTCGATGCAGCAGGAAAGAATGGAATGCGAAGAGATTGGATAATCAGGGATCACTACACCAAAGAGATCATAACAAGAGCCACAAGCACATGGGTGATCATGAATAGACAAACAAGAAGACTTTCCAAGATCCCTGAAGAGGTTAAACAAGAGCTTGTTCCTTTTTACCTAAACAGGCTTGCCGTTCCTACCGAAGAAGTAGATTGTGAGAGAATAGACAAACTCACTGATGACACAGCTGAGAGAATCCGATCTGGGTTGGCTCCAAGGTGGAATGACATGGACGCTAACCAGCATGTCAACAATGTGAAATACATTGGATGGATTTTAGAGAGTGTGCCAATTGAAGTTCTAGAGCATTATAATATGACAAGCATGACTTTGGAGTATCGACGTGAATGCACACAATCAAATATTGTGGAATCAATGACGTCTCCAACAGAAAGAGTTTTTGAGTCCAATAATAATTCCAAGAACAGAAAACCGGACCTGCAATACACACACTTGCTTCGTCTGCAACATGATAAAGCAGACGTTGTTCGAGCCAGAACTGAGTGGAATTTCAAGCAAAACCAACAGTGA 1131 0.4147 MAAISNIRLQFPRNLNDSKKNVRFYAPCNITNVFNNKRRFLSVTANYSESPRKMDTANRVNVNGTHVAEAPLQAGKFAKESAADEAIVTSLRGRFVEDKFVFRQIFVIRSYEIGPDKTATMETLMNFLQETALNHVTSSGIGGEGFGATREMSLRKLIWVVTRIQLQVQKYNKWGDEIEVDTWVDAAGKNGMRRDWIIRDHYTKEIITRATSTWVIMNRQTRRLSKIPEEVKQELVPFYLNRLAVPTEEVDCERIDKLTDDTAERIRSGLAPRWNDMDANQHVNNVKYIGWILESVPIEVLEHYNMTSMTLEYRRECTQSNIVESMTSPTERVFESNNNSKNRKPDLQYTHLLRLQHDKADVVRARTEWNFKQNQQ* 377
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1701 376 Pfam Acyl-ACP thioesterase 101 370 IPR002864 GO:0006633|GO:0016790
Pvu9g1701 376 Gene3D Hotdog Thioesterase 93 375 - -
Pvu9g1701 376 PANTHER ACYL-[ACYL-CARRIER-PROTEIN] HYDROLASE 26 375 - -
Pvu9g1701 376 CDD 4HBT 102 218 - -
Pvu9g1701 376 PANTHER OLEOYL-ACYL CARRIER PROTEIN THIOESTERASE 1, CHLOROPLASTIC 26 375 IPR045023 GO:0006633|GO:0016297
Pvu9g1701 376 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 257 369 IPR029069 -
Pvu9g1701 376 SUPERFAMILY Thioesterase/thiol ester dehydrase-isomerase 96 243 IPR029069 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1701 Pvu-Chr9 24029045 24031442 Dispersed/Proximal
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1701 93 372 Acyl Lipid Metabolism Gene Families AT1G08510 56.429 1.51e-111 330
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1701 K10781 - gmx:100814191 664.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1701 9 24029045 24031442 Pvu9g1701 9 24029045 24031442 ECH