Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1697 ATGATTGGAAGCTCTACGAAAAAGGTTCTTAACGGGCTGAAGAAAAAGGGATATGATGTATACCTTGTAGGAGGTTGTGTGCGGGATCTTATTCTAAATCAAACACCAAAGGACTTTCATATTATAACTTCAGCCGAGCTTAAAGAGGTGATGAGAACATTTTCATGGTGTGAGATAGTTGGTAAACGTTTTCCTGTATGCCATGTTCAATTGGATGGTACCATTGTTGAGGTTTCAAGTTTTGATGCCAAGTTCAAGGCAGATTTTGAATTCTCTCATCATACTGAAGCACTCAATGGCGTTGACAAGAAGGATCATCTTCGTTGGATGAATTGTTTAAACCGAGACTTCACAATTAATGGGTTGATGCTTGATCCACATGCAAGAATTGTCTATGATTATTTTGGAGGAATAGAAGATATTAGAAAAGCTAAAGTGCGAACAATAATCCCTGCTGAAACTTCATTTAAGGAAGATTGTGCTCACATCCTACGTGCAATTAGAATTGCTGCTCGCATAGGATTTAGTATTTCAAAGGAGGCAGCTCATCATATTAGGAAATTGTCTTCTTCAGTGTTAAGCCTTGATAAGGGTAGGCTGTTGATGGAAATGAATCATATGCTAGCATATGGTTCCGGGGAAGCTTCTCTGAGGCTGTTATGGAAATTTGGTCTTCTAGATATACTTTTCCCCTTTCAGGCTGCTTATTTTGCTCACCATGGATTTCAAAGACGGGATAGAAGAACCAATATGCTTCTGTCTTTGTTCTCCAATCTGGATAAACTTTTGGCACCTAATCGACCATGTCATAATAGCTTATGGGTTGGTATCTTAGCATTACACAAAACATTGAGTGATCGACCAAGGGACCCCTTGGCAGTTGCTGCGTTCAGCATTACCATCCATAATGGTGGAAATTTGTCGGAAGCGGTATACATAGCAGGGATGATCAACAAACCACACGATGTCAGATTTCCTGAATTATTAAATCATTCAGGTCTGGAAACCGAGTCATTGGAAGCTGAGATTCTGGATCTTGCTGAGTCTGTCAGAGGGACAATGTTGCAGATGACAAATGAGTATTTTGTGTCTCAGGCTATGGCTGACTATCCTCAAGCCCCTCATTCGAATTTGGTATTCATCCCGTTATCATTATACCTAGAAGTATACAAAATTTTCGATGGTGTGAGAGTGAGTACTGTTCAGAAATTTTTGTCAAAGCAACGCCGGGAAATTGATTACGACTCTTTAGCTCTGGGTAACCTGCAAGAAGTACGACATGTTTTTGCAAGGGTTGTATTTGATACCGTCTACCCAATTCATCAAAATCAAAGTCAGTTATGA 1344 0.3981 MIGSSTKKVLNGLKKKGYDVYLVGGCVRDLILNQTPKDFHIITSAELKEVMRTFSWCEIVGKRFPVCHVQLDGTIVEVSSFDAKFKADFEFSHHTEALNGVDKKDHLRWMNCLNRDFTINGLMLDPHARIVYDYFGGIEDIRKAKVRTIIPAETSFKEDCAHILRAIRIAARIGFSISKEAAHHIRKLSSSVLSLDKGRLLMEMNHMLAYGSGEASLRLLWKFGLLDILFPFQAAYFAHHGFQRRDRRTNMLLSLFSNLDKLLAPNRPCHNSLWVGILALHKTLSDRPRDPLAVAAFSITIHNGGNLSEAVYIAGMINKPHDVRFPELLNHSGLETESLEAEILDLAESVRGTMLQMTNEYFVSQAMADYPQAPHSNLVFIPLSLYLEVYKIFDGVRVSTVQKFLSKQRREIDYDSLALGNLQEVRHVFARVVFDTVYPIHQNQSQL* 448
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1697 447 Gene3D Beta Polymerase, domain 2 3 147 IPR043519 -
Pvu9g1697 447 SUPERFAMILY Nucleotidyltransferase 6 143 IPR043519 -
Pvu9g1697 447 PANTHER POLYNUCLEOTIDE ADENYLYLTRANSFERASE-RELATED 1 444 - -
Pvu9g1697 447 Gene3D - 148 300 - -
Pvu9g1697 447 Pfam Poly A polymerase head domain 20 147 IPR002646 GO:0003723|GO:0006396|GO:0016779
Pvu9g1697 447 SUPERFAMILY Poly A polymerase C-terminal region-like 146 266 - -
Pvu9g1697 447 CDD NT_ClassII-CCAase 7 143 IPR002646 GO:0003723|GO:0006396|GO:0016779
Pvu9g1697 447 PANTHER POLYNUCLEOTIDE ADENYLYLTRANSFERASE FAMILY PROTEIN 1 444 - -
Pvu9g1697 447 Pfam Probable RNA and SrmB- binding site of polymerase A 174 235 IPR032828 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1697 Pvu-Chr9 23976143 23991033 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1697 - - pvu:PHAVU_009G164400g 879.011