Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu9g1691 | CTCGAACATCTCCAAGCCAAATATGTTGGAACTGGTCATGCCGATTTGAACAGATTTGAGTGGGCAGTGAACATTCAACGTGATAGCTATGCATCATATATTGGTCACTATCCTTTACTGGCATACTTTGGTATTGCTGAAAATGAATCTATTGGAAGGGAACGCTATAGCTTTATGCAGAAAATGCTCCTGCCTTGCGGTTTACCTCCCGAAAGAGAAGAGGATTAA | 228 | 0.4167 | LEHLQAKYVGTGHADLNRFEWAVNIQRDSYASYIGHYPLLAYFGIAENESIGRERYSFMQKMLLPCGLPPEREED* | 76 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu9g1691 | 75 | PANTHER | SPLICING FACTOR SUBUNIT | 1 | 62 | - | - | |
| Pvu9g1691 | 75 | Pfam | Splicing factor 3B subunit 10 (SF3b10) | 1 | 70 | IPR009846 | - | |
| Pvu9g1691 | 75 | PIRSF | SF3B5 | 1 | 75 | IPR017089 | GO:0000398 | |
| Pvu9g1691 | 75 | PANTHER | SPLICING FACTOR 3B SUBUNIT 5 | 1 | 62 | IPR009846 | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu9g1691 | Pvu-Chr9 | 23855532 | 23859223 | Dispersed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu9g1691 | K12832 | - | pda:103700706 | 157.147 |