Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1671 ATGGCTCCTCCCAGAGGTGGTTTTTCTGGTCGCGGTGGTTCTGGTGGTGGATTCAGGGGTGGTAGGGGTGACAGAGGTAGAGGAAGAGGTGGTGGAGGAAGAGGTGGAGACAGGGGTACGCCCTTCAAAGCTAGAGGTGGAGGCAGAGGTGGTGGTGGTCGTGGAGGCGGCCGGGGTGGTGGCCGTGGTGGTGGCAGAGGTGGAATGAAGGGTGGTAGCAAAGTCGTGGTTCAGCCACACAGACACGAAGGAATTTTTATTGCTAAGGGTAAAGAAGACGCACTTGTCACCAAGAATCTTGTTCCTGGCGAAGCTGTTTACAATGAGAAAAGAATTACTGTCCAGAATGAAGATGGTTCCAAAGATGAATACAGAATTTGGAATCCTTTCCGTTCAAAGTTGGCCGCGGCAATCCTTGGTGGAGTTGACAACATCTGGATTAAACCGGGAGCCAGAGTCCTTTACTTAGGAGCTGCTTCTGGGACAACTGTTTCTCACGTGTCTGACGTTGTTGGCCCTACAGGAGTTGTCTATGCAGTAGAGTTTTCTCATAGAAGTGGTCGTGATTTGGTCAACATGGCAAAAAAACGTACTAATGTTATACCCATTATTGAAGATGCTAGACATCCAGCTAAATACAGAATGTTGGTTGGAATGGTTGATGTCATTTTTTCTGATGTTGCACAGCCTGATCAGGCAAGGATTTTGGGATTGAATGCTTCGTATTATCTAAAAGCAGGAGGACATTTTGTTATTTCAATTAAGGCTAACTGCATAGACTCCACAGTGCCTGCTGAGGCAGTGTTTGAAAGCGAAGTGAACAAGTTGAAGGCTGATCAATTCAAACCATTCGAGCAAGTTACCCTTGAACCATTTGAGAGGGACCATGCTTGTGTGGTTGGTGGATACAGAATGCCCAAGAAGAAAAAAGATGTTGCTTAG 942 0.4692 MAPPRGGFSGRGGSGGGFRGGRGDRGRGRGGGGRGGDRGTPFKARGGGRGGGGRGGGRGGGRGGGRGGMKGGSKVVVQPHRHEGIFIAKGKEDALVTKNLVPGEAVYNEKRITVQNEDGSKDEYRIWNPFRSKLAAAILGGVDNIWIKPGARVLYLGAASGTTVSHVSDVVGPTGVVYAVEFSHRSGRDLVNMAKKRTNVIPIIEDARHPAKYRMLVGMVDVIFSDVAQPDQARILGLNASYYLKAGGHFVISIKANCIDSTVPAEAVFESEVNKLKADQFKPFEQVTLEPFERDHACVVGGYRMPKKKKDVA* 314
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1671 313 MobiDBLite consensus disorder prediction 1 74 - -
Pvu9g1671 313 SMART Fibrillarin_2 77 305 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pvu9g1671 313 PANTHER RRNA 2-O-METHYLTRANSFERASE FIBRILLARIN 9 311 - -
Pvu9g1671 313 PIRSF Nop17p 42 307 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pvu9g1671 313 ProSitePatterns Fibrillarin signature. 175 189 IPR020813 GO:0003723|GO:0006364|GO:0008168
Pvu9g1671 313 Pfam Fibrillarin 77 304 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pvu9g1671 313 Gene3D Vaccinia Virus protein VP39 128 305 IPR029063 -
Pvu9g1671 313 Hamap Fibrillarin-like rRNA/tRNA 2'-O-methyltransferase [flpA]. 91 304 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pvu9g1671 313 PANTHER FIBRILLARIN, S-ADENOSYL-L-METHIONINE-DEPENDENT METHYLTRANSFERASE-RELATED 9 311 - -
Pvu9g1671 313 Gene3D Phosphorylase Kinase; domain 1 72 127 - -
Pvu9g1671 313 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 75 301 IPR029063 -
Pvu9g1671 313 PRINTS Fibrillarin signature 95 114 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pvu9g1671 313 PRINTS Fibrillarin signature 123 142 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pvu9g1671 313 PRINTS Fibrillarin signature 150 171 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pvu9g1671 313 PRINTS Fibrillarin signature 175 192 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pvu9g1671 313 PRINTS Fibrillarin signature 200 229 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pvu9g1671 313 PRINTS Fibrillarin signature 230 259 IPR000692 GO:0003723|GO:0006364|GO:0008168
Pvu9g1671 313 PRINTS Fibrillarin signature 282 303 IPR000692 GO:0003723|GO:0006364|GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1671 Pvu-Chr9 23507853 23510990 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1671 K14563 - gmx:100789137 508.064