Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1669 ATGGAGAACACTTCTGGGTTGTGTGTGTTATGGGTTATACTCCTGTTCGGGTGTGTCATTTTCTCTGAATCTAAGTATATAAGGTATAACACAACATCAACCATTGTCCCTGGCAAGCTCAACGTTCACTTGGTCCCTCACACTCACGACGATGTTGGCTGGTTGAAGACCATTGACCAGTATTATGTTGGTTCCAACAACTCAATTCAGGGAGCATGCGTTCAAAACGTGCTCGATTCCCTGGTACCCGCATTGTTGGCTGACAAGAATCGCAAGTTCATTTATGTTGAACAGGCATTTTTTCAGCGATGGTGGAGAGAACAAAGTGATGATATTCAGAACATAGTCAAGGAGCTGGTCAAATCTGGTCAATTGGAATTCATAAATGGAGGCTTTTGTATGCATGACGAGGCTGCTACTCATTACATTGACATGATTGATCAGACAACTCTTGGACATCAATTTCTCAAAGAAGAATTTGGAGTGACTCCGAGAATAGGGTGGCAGATCGATCCATTTGGACATTCTGCTGTGCAGGCCTACTTGTTGGGGGCAGAGGTTGGATTTGACTCTCTATTCTTTGGACGGATTGACTATCAAGACAGAGCAAAGAGAAAAGATGAAAAAACTCTCGAAGTTGTGTGGCGGGGCTCTAAGAGCTTTGGTTCATCATCACAGATATTTTCTGGTGCGTTCCCTGAGAATTATGAACCTCCCAGTAATTTCTACTATGAAGTAAATGACAATTCTCCCATTGTTCAGGATGATGTGAGTTTATTTGACTACAATGTCCCTGAAAGAGTAAACGAGTTTGTCGCAGCCGCAATATCACAGGCCAATATTACGCGCACAAATCATGTAATGTGGACAATGGGGACAGATTTCAAGTACCAATATGCGCAGAGCTGGTTTCGGCAAATGGATAAGTTTATTCACTACGTTAATCAAGATGGTCGGGTCCATGCCTTATACTCAACCCCATCAATATACACTGATGCCAAACATGCTACAAATGAGGCCTGGCCAATCAAGACTGATGACTACTTTCCGTATGCAGATCGTGTAAATGCATATTGGACAGGGTATTTTACAAGCAGGCCAGCTCTCAAAGGTTATGTCAGACTGATAAGTGGATATTACTTGGCAGCAAGGCAATTGGAGTATTTCAAAGGGAAGAGTGCCTTAGGTCCAAAAACTGACTCTTTGGCTGAAGCTTTGGCTATTGCTCAACATCATGATGCAGTATCTGGTACAGAAAAGCAGCATGTTGCTGATGATTATGCTAAACGACTTTCAATAGGTTATACAGAGGCTGAGAAAGTTGTTGCAGAATCACTTGCTTGTTTGACAGAAGGAGGAACCAAAACGGGATGTAAGAACCCACAGATTAAATTTCAACAGTGTCCACTTCTGAACATAAGTTACTGTCCTGCATCAGAAATCGACTTCTCCAATGGGAAAAATCTGGTGGTTGTTGTTTACAATCCTCTGGGATGGAAAAGAGAGGATATCATAAGGATTCCGGTTGTCAATGAAAACGTTGGTGTTCGGGATTCCAGTGGAAAAATAGTCCAATCCCAGCTGGTGCCAATACCTGATGTTTTTCTTGGCTTAAGAAACTATCACACTGTGGCCTACTTGGGAGTGTCTCCGACTGTGAAACCCAAATACTGGCTTGTTTTTCCGGCAGCTGTTCCCCCACTTGGTTTTAGCACTTACTATGTATCTTATGCCAAAAATGAAGCTACTGTTTCAGATAGAGATGCAGCTTACAAGTCAAAGAATTGGAGTGATGCAATTACAGTGGGTCCAGAAAACTTGAAATTAACTTATTCTGTGAAGGAAAGGAAACTTACTGAATATATCAACTACAGAAGCAAGGTGAAAGAATCCGTAGAGCAGACATATAAATTTTACGCGGGCAGAGAATTTGATGGACAGGCATCTGGAGCATATATTTTTAGACCTGATGGTTCACCATCTCCCATCAAAAACAGCCAGTCTCCTCTCACAGTTTTTCGGGGACCAATTGTGCATGAAGTGCATCAACAGATCAATTCATGGATATACCAGGTACTATATAACTTTATACATATAAAAGAAAGAAAGAAAAAGACACATAAAATAAGCAGAGTCAGATGTCACCCACTTATCTCATACATGTCCTTGGGCAAGGACATCAGAAGTAAGTGA 2193 0.4168 MENTSGLCVLWVILLFGCVIFSESKYIRYNTTSTIVPGKLNVHLVPHTHDDVGWLKTIDQYYVGSNNSIQGACVQNVLDSLVPALLADKNRKFIYVEQAFFQRWWREQSDDIQNIVKELVKSGQLEFINGGFCMHDEAATHYIDMIDQTTLGHQFLKEEFGVTPRIGWQIDPFGHSAVQAYLLGAEVGFDSLFFGRIDYQDRAKRKDEKTLEVVWRGSKSFGSSSQIFSGAFPENYEPPSNFYYEVNDNSPIVQDDVSLFDYNVPERVNEFVAAAISQANITRTNHVMWTMGTDFKYQYAQSWFRQMDKFIHYVNQDGRVHALYSTPSIYTDAKHATNEAWPIKTDDYFPYADRVNAYWTGYFTSRPALKGYVRLISGYYLAARQLEYFKGKSALGPKTDSLAEALAIAQHHDAVSGTEKQHVADDYAKRLSIGYTEAEKVVAESLACLTEGGTKTGCKNPQIKFQQCPLLNISYCPASEIDFSNGKNLVVVVYNPLGWKREDIIRIPVVNENVGVRDSSGKIVQSQLVPIPDVFLGLRNYHTVAYLGVSPTVKPKYWLVFPAAVPPLGFSTYYVSYAKNEATVSDRDAAYKSKNWSDAITVGPENLKLTYSVKERKLTEYINYRSKVKESVEQTYKFYAGREFDGQASGAYIFRPDGSPSPIKNSQSPLTVFRGPIVHEVHQQINSWIYQVLYNFIHIKERKKKTHKISRVRCHPLISYMSLGKDIRSK* 731
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1669 730 Gene3D Glycoside hydrolase family 38, central domain 400 454 IPR037094 GO:0004559|GO:0006013
Pvu9g1669 730 PANTHER ALPHA-MANNOSIDASE 13 679 - -
Pvu9g1669 730 SMART Alpha_mann_mid_2 357 431 IPR015341 GO:0004559|GO:0006013
Pvu9g1669 730 SUPERFAMILY Families 57/38 glycoside transferase middle domain 356 451 IPR028995 -
Pvu9g1669 730 Pfam Glycosyl hydrolases family 38 C-terminal domain 605 693 IPR011682 GO:0004559|GO:0006013
Pvu9g1669 730 SUPERFAMILY Glycoside hydrolase/deacetylase 29 353 IPR011330 GO:0005975
Pvu9g1669 730 Pfam Glycosyl hydrolases family 38 N-terminal domain 41 352 IPR000602 GO:0004559|GO:0006013
Pvu9g1669 730 Gene3D Glycoside hydrolase family 38, central domain 321 399 IPR037094 GO:0004559|GO:0006013
Pvu9g1669 730 CDD GH38N_AMII_LAM_like 40 316 - -
Pvu9g1669 730 Gene3D - 467 576 IPR013780 -
Pvu9g1669 730 Gene3D - 577 723 - -
Pvu9g1669 730 Pfam Alpha mannosidase middle domain 357 449 IPR015341 GO:0004559|GO:0006013
Pvu9g1669 730 Gene3D Glycoside hydrolase 38, N terminal domain 40 320 IPR027291 -
Pvu9g1669 730 SUPERFAMILY Galactose mutarotase-like 462 694 IPR011013 GO:0003824|GO:0005975|GO:0030246
Pvu9g1669 730 PANTHER ALPHA-MANNOSIDASE 13 679 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1669 Pvu-Chr9 23477566 23482597 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Pvu9g1669 1 692 Glycoside Hydrolase AT5G13980 68.085 0.0 979
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1669 K01191 - gmx:100798150 1273.84
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1669 9 23477566 23482597 Pvu9g1669 9 23477566 23482597 ECH