Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1654 ATGTGTACCCTCGAACCCGACGTCGTTGCCGTCCGCGGCTACGAGCTACGCCTCATTCGCTGCACCCTCGGTCCTTCGCAGCCGTCGGATATCCGCCACGACCAAGAATCCTTGGATGTCCTCATCAACGACCTCTTGAATTCCATCGAGTGTGGCAGCTACGTCGAAGCACTCACCTCCGAACCCTCATCCACCGTATTCCAACTAGGCGGTCATTACTCGCTTCCACTCGACGCCCCTGACCGACTCTACTCCGAGTTGGTCCACCGCGCTGAATCCTTCATCACAGACGCCGCCACTAACGCCGCCGAACAGCGTCGCAGGGCGGTAATTGTCATGTGCCTCGCGGTTGCCGCATTTCTAGGGTTCACTCAAGCAAACTTCACCGGGCCTTTGAAAGGAACAGAGCTACCGAAATGTCCTCTGTGTTTGGATGGTAGTGATGAATGGGAAAATTGGGCGCGGAATCAGCTTATGTCTGCTGGTTCCGACTTGCTTGGGAAGTTCTCGAATCTTCAGTATATAGTTTTTGCCAAGATGTTGCTTATGCGGATGAAGGATTTACGCGTTGAGATTGGAAGCCTGTCGTGGTGGCTTGCGAGGGTTTTGCTTCTTCAACAGAGAGTTTTGGATGAGCGGTCTTCGTCCTTGTCTGATCTCTTGCATGTCTACATGGGTGAAGCTTTGCAGCAATTCGGCACTTCGGAAGTAGTTCGGAGTTACTGGGAGGATGGTTTACGCAATGGCGAGAGCTTGGATATTGTCTCCATGCTTCATTTAGAGTCTGGCATTATGGAATATAGATATGGACGAGTTGACTCTTGCAGGATGCATTTTGAGTTAGCTGAGATGGCAGCTGGGCTTCAGCTTTCAGTTACTGGGGTACTAGGTTTCCGTTCTGTACATCAGGCAGAGCCTAAGGCGCAGATGGTACTTGTTACGAACACAAGTACATCAAATGTGGATAATGTAATGGGTACTCATATCCAAACATGTGATTCCAACAATGGTGAAGATAACTGGAATTTGCATCAGTTTGAAACCTCTGAGGCATCTGACATACTTAGAATACCGAAGTTGTTAGAAAAGGATGACTCTAAAACTAAGTCACAAGGCATGGAAAGTGGTGCCCATGTTACTCCAAGTTTGTCAGCAACACAACAAGCTGTAATTCTGGCACATTGTCTTCTAATAGAGAAGAGCTCCCGACAAGACGAATTGCAAAGATGGGATATGGCACCTTACATTGAGGCAATTGATTCCCAACATTCTTTTTACTTCACTATACGGTGTTTATGTGATAATTTACGTATTCGGTGGGAGTCATCTCGTAGCCGAACTAAGGAGCGTGCCTTACTGATGATGGATAACTTGGTTAAACGTATATATGAATCTTCACCATCAATAGCAGAAAGAATTGCTTTCAGTTATGCTGTTTATATGCCTAGTATTCCTGCATTACGGAAGGAATATGGGTTGCTTTTGGTGCGATGCGGTTTGATAGGGGAGGCAATGAAGGAGTTTGAAGATTTAGAATTATGGGATAATCTTATATACTGCTACAGTCTGTTGGAGAAGAAAGCAAGTGCTGTTGAACTTATCAGGAAATGTCTCTCCGAAAGACCAAATGATCCTAGGTTATGGTGCTCCCTGGGTGACACTACTGCTAATGATGCATACTATGAAAAAGCTCTGGAAGTTTCAAACAATAGGTCTGCTAGAGCGAAGTGTTCTCTAGCTCGCAGTGCGTACCACCGAGGAGACTATGTTACATCTACAACTTTGTGGGAGTCTGCAATGTCAATGAACTCTATGTATCCTAATGGTTGGTTTTCATTTGGGGCTGCTGCGTTGAAGGCTCGGGATAAAGAAAAGGCCCTGGATGCATTTACTCGCGCTGTTCAACTTGATCCTGAAAATGGGGAGGCTTGGAATAACATTGCATGCTTGCATATGATCAAGAAAAAGAGCAAGGAGGCCTTCATTGCATTTAAAGAAGCCTTGAAATTCAAACGAAACAGCTGGAGAATGTGGGAGACCTATGGCCTTGTTGCTGTTGACATTGGCAATATCAGTCAGGCACTGGAAGCTGTCCAGATGATTTTGGACATGACCAATAATAAGGTAGTAGATTCTGAATTATTGGAAAGAATCACAACGGAGCTGGAAAAGCGGGTTTCAACAAGCAATGTGCCTCCTTTGATAACTGAAAATGAGCCTAAAGCAGATCAATTCTGCGTTGTCGATTCCGGATCAGTATCTATTGCAGGAAGATCACGTGAAACTGAACAATTATTATTATTTCTTGGAAAAGTTTTACAACAGATAGTTAAAAGTGGGAGTGGATGTGGACCTGATATCTGGGGCTTATATGCCAAATGGCACAGAATTAATGGAGATCTCACTATGTGTTCTGAAGCCCTATTAAAGCAAGTTAGGTCACTCCAGGGATCTGATACATGGAAGGACCGAGACCGCTTCAAAAAGTTTGCAAAAGCATCTTTGGAGCTTTGCCAGGTGTACGTGGAAATTTTTTCATCTACTGGTAGTATTAAACAATTGTCTACGGCTGAGATGCACCTGAAGAATGTCATCAGACAGGCTGAGAGCTTTTCCGATACCGACGAGTTCAGGGATCTTCAGGCTTGCTACGATGAAGTGAAAATTAAAATCCAATCGAACTCAATGCGTGGCTAA 2697 0.4501 MCTLEPDVVAVRGYELRLIRCTLGPSQPSDIRHDQESLDVLINDLLNSIECGSYVEALTSEPSSTVFQLGGHYSLPLDAPDRLYSELVHRAESFITDAATNAAEQRRRAVIVMCLAVAAFLGFTQANFTGPLKGTELPKCPLCLDGSDEWENWARNQLMSAGSDLLGKFSNLQYIVFAKMLLMRMKDLRVEIGSLSWWLARVLLLQQRVLDERSSSLSDLLHVYMGEALQQFGTSEVVRSYWEDGLRNGESLDIVSMLHLESGIMEYRYGRVDSCRMHFELAEMAAGLQLSVTGVLGFRSVHQAEPKAQMVLVTNTSTSNVDNVMGTHIQTCDSNNGEDNWNLHQFETSEASDILRIPKLLEKDDSKTKSQGMESGAHVTPSLSATQQAVILAHCLLIEKSSRQDELQRWDMAPYIEAIDSQHSFYFTIRCLCDNLRIRWESSRSRTKERALLMMDNLVKRIYESSPSIAERIAFSYAVYMPSIPALRKEYGLLLVRCGLIGEAMKEFEDLELWDNLIYCYSLLEKKASAVELIRKCLSERPNDPRLWCSLGDTTANDAYYEKALEVSNNRSARAKCSLARSAYHRGDYVTSTTLWESAMSMNSMYPNGWFSFGAAALKARDKEKALDAFTRAVQLDPENGEAWNNIACLHMIKKKSKEAFIAFKEALKFKRNSWRMWETYGLVAVDIGNISQALEAVQMILDMTNNKVVDSELLERITTELEKRVSTSNVPPLITENEPKADQFCVVDSGSVSIAGRSRETEQLLLFLGKVLQQIVKSGSGCGPDIWGLYAKWHRINGDLTMCSEALLKQVRSLQGSDTWKDRDRFKKFAKASLELCQVYVEIFSSTGSIKQLSTAEMHLKNVIRQAESFSDTDEFRDLQACYDEVKIKIQSNSMRG* 899
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1654 898 Gene3D Tetratricopeptide repeat domain 448 724 IPR011990 GO:0005515
Pvu9g1654 898 ProSiteProfiles TPR repeat profile. 607 640 IPR019734 GO:0005515
Pvu9g1654 898 Pfam Tetratricopeptide repeat 642 673 IPR019734 GO:0005515
Pvu9g1654 898 PANTHER UNCHARACTERIZED 29 888 IPR044244 -
Pvu9g1654 898 SUPERFAMILY TPR-like 489 708 IPR011990 GO:0005515
Pvu9g1654 898 SMART tpr_5 511 544 IPR019734 GO:0005515
Pvu9g1654 898 SMART tpr_5 573 606 IPR019734 GO:0005515
Pvu9g1654 898 SMART tpr_5 641 674 IPR019734 GO:0005515
Pvu9g1654 898 SMART tpr_5 607 640 IPR019734 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1654 Pvu-Chr9 23203134 23222717 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1654 K24935 - gmx:100803449 1509.2