Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Pvu9g1652 | ATGGATTTGGAAGCGGTGAAGAGGTACTTGGAGAAAGGAGTGGGAACATCATCGGAGGTTGATGGGTTACCACCAAGGTTTCTCGAACCCTTAGTAATGAATTCCCTTAAAGTTGATCTCATCCAACCTGGTCGCATTGTCTGTTCCATGAAGATACCTCAACGTTTACTCAACGCTGGCAATTCGTTGCACGGTGGTGCCACCGCTGCGCTGGTGGATGTGGTGGGGTCCGCCGTGATTCCCACCGTTGGATACTCAGGTTCCACTACGGGGGTTTCCGTCGAGATTAATGTTTCCTATTTGGATGCTGCCTATGTCGATGAGGAGATTGAGATCGAGGCCAGGGCACTGCGTGTAGGGAAGGCTGTTGCTGTTATAAGCGTAGAGTTCAAGAAGAAAAAAACAGGCAAAATTTTTGCCCAGGGGCGTCATACCAAATTTCTTCCTCTTTCCAGTAAAATGTGA | 465 | 0.486 | MDLEAVKRYLEKGVGTSSEVDGLPPRFLEPLVMNSLKVDLIQPGRIVCSMKIPQRLLNAGNSLHGGATAALVDVVGSAVIPTVGYSGSTTGVSVEINVSYLDAAYVDEEIEIEARALRVGKAVAVISVEFKKKKTGKIFAQGRHTKFLPLSSKM* | 155 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Pvu9g1652 | 154 | PANTHER | THIOESTERASE SUPERFAMILY MEMBER-RELATED | 1 | 154 | IPR039298 | GO:0047617 | |
| Pvu9g1652 | 154 | SUPERFAMILY | Thioesterase/thiol ester dehydrase-isomerase | 35 | 145 | IPR029069 | - | |
| Pvu9g1652 | 154 | TIGRFAM | unchar_dom_1: uncharacterized domain 1 | 42 | 145 | IPR003736 | - | |
| Pvu9g1652 | 154 | PANTHER | F19P19.27 PROTEIN | 1 | 154 | - | - | |
| Pvu9g1652 | 154 | CDD | PaaI_thioesterase | 36 | 148 | - | - | |
| Pvu9g1652 | 154 | Pfam | Thioesterase superfamily | 61 | 137 | IPR006683 | - | |
| Pvu9g1652 | 154 | Gene3D | Hotdog Thioesterase | 26 | 150 | - | - |
Duplication type information
| Select | Gene | Chromosome | Start | End | Duplicated_type |
|---|---|---|---|---|---|
| Pvu9g1652 | Pvu-Chr9 | 23181270 | 23182914 | Transposed |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Pvu9g1652 | K17362 | - | gmx:100805426 | 268.085 |