Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Pvu9g1628 ATGAACTCACCAATTCGTGCACCTTCATCATCAGCATCTTCTTCTTCTTCTTCCTCCCATGTGTTTCGTCCTCCTCCATGCCTCACTCATGCTTCTCGTAACCTCAAGGGTCCTCTGTTGTTTCCACAGACAATCTGTACCTCTCAGAAGAAGATTCGCTGCTTTGGAGCTCATGTAGAGGCTTCTTTTAGCACTAATCCCTTGAAAAATTACAAATCGTCCAGATGTTCTCCATGGTGGTCTGAAGCACAATCCCTGGTTTCTAATCAATCACTCAACAAACAGTTCTCAGTAGGATCTTTAGCAACTTCTACATCTCAAGGTGTTTCTGATACCACTCGTCTTATTGATGATAAGATTGGAGTGTTACTGTTAAACCTTGGAGGTCCAGAGACTCTAGAAGATGTGCAGCCTTTTTTGTTTAACCTTTTTGCCGACCCGGACATAATACGATTGCCAAGGATATTTAGTTTTCTTCAAAAGCCATTGGCCCAATTTGTATCTATTGTAAGGGCCCCAAAAAGCAAAGAAGGCTATGCTTCAATCGGTGGTGGCTCTCCTCTCAGACGTATGACTGATGCACAGGCTGAAGAGTTGAAGAAATCTCTTTGGGAAAAGAATGTCCCAGCTAATGTGTATGTTGGAATGCGTTACTGGCATCCTTTCACTGAAGAAGCTATTGAGCAGATTAAAAGGGATGGAATTACAAAGCTTGTTGTTCTTCCACTTTATCCTCAATTCTCAATCTCGACTAGTGGCTCAAGCCTACGTCTGCTGGAGAATATATTCCGAGAGGATGAGTATCTAGTCAACATGCAGCACACAGTAATACCATCATGGTATCAACGCGAAGGGTACATAAAGGCAATGGCAAATTTAATTGAAAAAGAGCTGAAGAGTTTTGACTGCCCTGAGGAGGTCAGGATATTCTTCAGTGCACATGGGGTGCCTCTTGCCTATGTGGAAGAGGCTGGTGATCCATACAAGGTTGAAATGGAGGAATGTGTGGATTTGATCATGGAAGAACTCGAGACAAGAAAGATAACTAATGCTTACACCCTTGCTTATCAGAGTAGAGTTGGACCAGTGGAATGGTTAAGACCCTACACAGACGAGACAATAATTGAACTTGGAAAAAAGGGAGTGAAAAGTCTGCTGGCTGTTCCAATTAGCTTTGTCAGTGAGCACATTGAAACTCTTGAAGAAATTGATGTTGAGTACAAAGAATTGGCTCTAGAATCTGGTATAGAAAATTGGGGCCGTGTTCCTGCTCTAGGATGTGAACCTACCTTCATTTCTGATTTGGCAGATGCTGTCATTGAGAGTCTCCCGTATGTTGGTGCCCTGGCAGCCTCAGACCTTGAAGCTCGACAGTCCCTTGTTCCACTGGGCAGTGTAGAAGAGTTATTGGCAGCATATGATACACAACGCAAGGAGTTGCCACCACCAGTTATAGTGTGGGAATGGGGTTGGACAAAAAGTGCTGAAACTTGGAATGGAAGAGTAGCAATGCTGGCTGTGCTTCTTATTTTGTTTCTTGAAGTCACTACAGACAAGGGTTTGCTGCACCAGGTCGGAATATGGCCCTCACTTAGGTGA 1599 0.4371 MNSPIRAPSSSASSSSSSSHVFRPPPCLTHASRNLKGPLLFPQTICTSQKKIRCFGAHVEASFSTNPLKNYKSSRCSPWWSEAQSLVSNQSLNKQFSVGSLATSTSQGVSDTTRLIDDKIGVLLLNLGGPETLEDVQPFLFNLFADPDIIRLPRIFSFLQKPLAQFVSIVRAPKSKEGYASIGGGSPLRRMTDAQAEELKKSLWEKNVPANVYVGMRYWHPFTEEAIEQIKRDGITKLVVLPLYPQFSISTSGSSLRLLENIFREDEYLVNMQHTVIPSWYQREGYIKAMANLIEKELKSFDCPEEVRIFFSAHGVPLAYVEEAGDPYKVEMEECVDLIMEELETRKITNAYTLAYQSRVGPVEWLRPYTDETIIELGKKGVKSLLAVPISFVSEHIETLEEIDVEYKELALESGIENWGRVPALGCEPTFISDLADAVIESLPYVGALAASDLEARQSLVPLGSVEELLAAYDTQRKELPPPVIVWEWGWTKSAETWNGRVAMLAVLLILFLEVTTDKGLLHQVGIWPSLR* 533
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Pvu9g1628 532 CDD Ferrochelatase_C 288 426 IPR033644 -
Pvu9g1628 532 MobiDBLite consensus disorder prediction 1 20 - -
Pvu9g1628 532 TIGRFAM hemH: ferrochelatase 118 443 IPR001015 GO:0004325|GO:0006783
Pvu9g1628 532 SUPERFAMILY Chelatase 118 445 - -
Pvu9g1628 532 SUPERFAMILY Chlorophyll a-b binding protein 487 528 - -
Pvu9g1628 532 ProSitePatterns Ferrochelatase signature. 309 328 IPR019772 GO:0004325|GO:0006783
Pvu9g1628 532 PANTHER FERROCHELATASE-1, CHLOROPLASTIC/MITOCHONDRIAL 61 453 - -
Pvu9g1628 532 PANTHER FERROCHELATASE 61 453 IPR001015 GO:0004325|GO:0006783
Pvu9g1628 532 CDD Ferrochelatase_N 120 282 IPR033659 -
Pvu9g1628 532 Pfam Ferrochelatase 119 442 IPR001015 GO:0004325|GO:0006783
Pvu9g1628 532 Hamap Coproporphyrin III ferrochelatase [cpfC]. 118 443 IPR001015 GO:0004325|GO:0006783
Pvu9g1628 532 Gene3D - 281 424 - -
Pvu9g1628 532 Gene3D - 119 442 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Pvu9g1628 Pvu-Chr9 22887977 22893875 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Pvu9g1628 K01772 - gmx:100785669 952.199
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Pvu9g1628 9 22887977 22893875 Pvu9g1628 9 22887977 22893875 ECH
Pvu2g2859 2 44203731 44209760 Pvu9g1628 9 22887977 22893875 PCT